| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0318 |
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| Symbol | |
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| ID | 3961279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 316348 |
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| End bp | 317961 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637915150 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_521603 |
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| Protein GI | 89899132 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCG ATTTTGACTG GTTGGTGATT GGCTCCGGTT TCGGGGGCAG CGTTTCAGCG
CTACGGCTTA CTGAGAAGGG CTACAGCGTC GGCGTGCTGG AGCGCGGTCG GCGGTTCCGC
GACGAGGACC TGGCCGAATC AGCATGGCAG CTCGGACGCT TTGTTTGGGC GCCGATCCTG
GGCCTCAAAG GCGTGATGCG CATGCGCGTC TTCCGGCATG TGTTCTTCCC GAGCCAGTCA
GCGGTTGGCG GTGGCAGCAC GGTCTATGGC GGCGTTCTCT ACCGGGCGCG TGACAAGTTC
TTTGAGAATG CGCAGTGGCG CGGGCTGGGC GACTGGGCAC GCGAACTGCG ACCGCACTAC
GAACAGGCCG AGCGGATGTT GGGGGTAAGC ACCGTGCCCT TCACATCCAC CAACCAGCGC
CTGGCGTTGT CGATGGCTCG GCACTTTGGC CGGGAGGACG ATTTCGTCCT GTCGCCGACG
GGTGTTTACT TCGGCGATCC TGGGGTGACC GTCAAAGACC CGTTCTTCGG CGGCCAGGGC
CCTGATCGCA CCGGATGCAT GCGGTGCGGA TCGTGCATGG TGGGCTGCCG TACTGGCGCG
ATGAACACGC TGACCAAGAA CTACTTGTGG TTCGCGGAGA AGCTTGGCGC GCAGATCAAG
GCGGAACGCG AAGTCGTCGA TGTGCGGCCG ATCGGCGCAG CAGATGGCAG CGAAGGCTAC
CAGGTGACCA CCCAGCGACC TGGTGCCTGG TTTGGCAGGG GGCGCCAAGT GCACACCGCT
CGCGGCATCG TGTTGGCGGG CGGCACCTTG GGGACGAACG AGCTGCTGGC GAACTGCAAG
CTGAGCGGTT CGCTGCCACG CATCAGTGAC CGCCTCGGTG ACCTGGTGCG CACCAACAGT
GAGTCGGTCC TGAACGTGCG ACTGCCCACC GACATGGAGA CCTGGAAGGA TGTCACCGCC
AGCAGCTGCG TGAGACTGGA TGACGAGACC CAGATCGAGT TCCTGACCTA TGGTCGGCGC
GCCGACCTCA TGGGGATGAT GTACACACTG TTGGTCGGAA GGGGAAACCG CGTCACGCGA
CCGCTCAAGT GGCTCGGCGC GATTACTCAC CATCCCGTGC AATGGCTAAA GACGCTGTGG
CCGTTCGGCT GGAGTCGGCA CATGGTGACC CTGCTGGTGA TGCAGACCCT GGACAACGCG
ATCGCCTTGA AGCCCAGGAA GCGCTGGCTG GGCGGGGGCT GGCGCGTTGT CACCGAGCAG
AATCGAGAGC GGCCGAATCC AACGTACATC GACGTTGCCA ACCAAGCAAC CCAGTGGCTC
GCGCGGCACA CCGGGGGCAT CGCCCAGAGC AACATCGTTG AGGCGTTGGC GAATATCCCT
ACCACTGCGC ACGTTCTGGG AGGAGCCGTG ATTGGCGCTG ATGCCTCAAG TGGCGTGATT
GATCAGCAGC TGCGCATATT CGGCTACAAG AACATGCTGG TCTGCGATGG AAGCGCGATG
CCAGCCAATC CTGGTGTCAA CCCGGCACTG ACGATTACAG CGTTGGCCGA ATACGCGATG
TCGCACGTTC CATCAGCAAC CACACACCGC CTTGGTACTG CAGGTCAGCC GTGA
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| Protein sequence | MKFDFDWLVI GSGFGGSVSA LRLTEKGYSV GVLERGRRFR DEDLAESAWQ LGRFVWAPIL
GLKGVMRMRV FRHVFFPSQS AVGGGSTVYG GVLYRARDKF FENAQWRGLG DWARELRPHY
EQAERMLGVS TVPFTSTNQR LALSMARHFG REDDFVLSPT GVYFGDPGVT VKDPFFGGQG
PDRTGCMRCG SCMVGCRTGA MNTLTKNYLW FAEKLGAQIK AEREVVDVRP IGAADGSEGY
QVTTQRPGAW FGRGRQVHTA RGIVLAGGTL GTNELLANCK LSGSLPRISD RLGDLVRTNS
ESVLNVRLPT DMETWKDVTA SSCVRLDDET QIEFLTYGRR ADLMGMMYTL LVGRGNRVTR
PLKWLGAITH HPVQWLKTLW PFGWSRHMVT LLVMQTLDNA IALKPRKRWL GGGWRVVTEQ
NRERPNPTYI DVANQATQWL ARHTGGIAQS NIVEALANIP TTAHVLGGAV IGADASSGVI
DQQLRIFGYK NMLVCDGSAM PANPGVNPAL TITALAEYAM SHVPSATTHR LGTAGQP
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