Gene Rfer_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0242 
Symbol 
ID3962300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp239737 
End bp240939 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content60% 
IMG OID637915077 
Producthypothetical protein 
Protein accessionYP_521530 
Protein GI89899059 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAGGA ACATGACAAA CCTCATCGGA GATGGGCTGG CGAAAATTGA GGCATGCGCG 
CAAGCCTCGT TGGCGCTGCT GCAGCACAAC CTCACACCGC ACGGTATTCT CGCGGCCAGC
CGGACCGAGG CCGCAATAGC ACGAAGATAC ACGCGTATAT TCGCGCGAGA TGCAGCCATT
TGCGTACTGG CAATGTGCGG CAGTGGAGAC GAGTTGCTGG AGCAGGGCGC GGTGGACAGC
CTGGACGTTT TGGCCACTCA GCAGGCGGGA AACGGGCAGA TTCCAAAATA TGTGGACCCC
GAGGGCCAGG ATGCCGATTT TTGGTACCTG GGGTGCATAG ACTCCACGCT ATGGTGGCTG
ATTGCGGTAG ACCATGTCCA CCGTCAGGGC GTCATCGATC CCGAGCGCTG GCAGGTCGAA
GTTCAACGGG CGATCGCCTG GCTGCTGGCC CAGGAGCACC AGCACTTCAG GCTGTTGCAA
CAAAATGAGG CCAGCGACTG GGCCGACATC ATGCCGCGCT CTGGCTACGT GCTGTACTCC
AATGCCCTGT GGTACGAAGT AAAACGGCGC TACGGCCTGA CCAGCATCCA GACGACGCAT
CACCACTTCA ACCATCTATT CAATCCCTTC CAGCGCGATT TGCCCGAGTA CCACCGGGCT
CGCCTGTTGC AGCACTATGC CCGCCGCGGT CAGCGTGATC CGGGGCTGTA CCTGAGTTTC
GTCAACCTCT CTTTTGCTGG CAATGAGGGC GATGTCTTTG GAAATCTGCT GGCCATCCTG
TGCGGCTTGG CCAGCGAATC AACCGGCCAT CGCATTGTCA AGACCATCAT CGCAGCGAAC
GCAAGTCAAC CCTACCCGAT TCGGGTGGTG CTTCATCCGC TGTCGCGCCA GCACGAGCTT
TGGCGTCCGT ACATGGCACG TCACCAGCAG AACCTGATGC ACCAGTACCA CAACGGAGGC
ATATGGCCGT TCGTGGGCGG CTTTTGGGTC ATGGCGCTGG TTCGCCTTGG CCTGCGGGAA
CTGGCCTGGC AAGAGCTCAC ACGGCTCTCC AGTGTGAACG AGCTCGACGA CTGGCGGTTT
ACCGAATGGT TTCACGGCCA TTCGCTCCAG CCCATGGGAA TGGCAGGACA GAGTTGGAAT
GCGGCTGCCT TTCTACTCGC GCGGCGCGCG GTTCTTGGGG TCTCTTCGTT TTCAGCGCCA
TAA
 
Protein sequence
MRRNMTNLIG DGLAKIEACA QASLALLQHN LTPHGILAAS RTEAAIARRY TRIFARDAAI 
CVLAMCGSGD ELLEQGAVDS LDVLATQQAG NGQIPKYVDP EGQDADFWYL GCIDSTLWWL
IAVDHVHRQG VIDPERWQVE VQRAIAWLLA QEHQHFRLLQ QNEASDWADI MPRSGYVLYS
NALWYEVKRR YGLTSIQTTH HHFNHLFNPF QRDLPEYHRA RLLQHYARRG QRDPGLYLSF
VNLSFAGNEG DVFGNLLAIL CGLASESTGH RIVKTIIAAN ASQPYPIRVV LHPLSRQHEL
WRPYMARHQQ NLMHQYHNGG IWPFVGGFWV MALVRLGLRE LAWQELTRLS SVNELDDWRF
TEWFHGHSLQ PMGMAGQSWN AAAFLLARRA VLGVSSFSAP