Gene Rfer_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0237 
Symbol 
ID3962295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp235386 
End bp236054 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content55% 
IMG OID637915072 
Productamino acid ABC transporter permease 
Protein accessionYP_521525 
Protein GI89899054 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTGA ATCTGAACTT TCGGGTCATC GGAGAAACCC TTCCAGAGTT CTGGGTGGGT 
TTCGTGTCCA CCTTGTCAAT TTCATTGACT GCTTTTGCCG GTGCGATTGC CATTGGCATC
ATCGCTTGTG CGATGAGCAT CCAGCCCTCC CGGTTGGTTC GGGCACCAGC GGTCGCCTAT
GTGGATGTCA TACGGGCCAC CCCCTTGCTG GCGCAGCTCT ATTTCCTGTA TTTCGGCTTG
CCAAGTTTCG GCGTGATCAT GCCCGAAACC GTGATTGGCA TCATCGCACT TTCGATCAAC
AGTGGCGCCT ATGTCAGCGA AATCATCCGC TCCGGAATCA TGTCGATTCC TCATGGGCAG
GTTGAAGCGA GTGCCAGTTC GGGCATGAAC TATTGGCAGC AAATGCGCCT CATCATTCTC
CCGCAGGCGC TGCGCCCCAT GGTGTCGCCT CTGATCGGGC AGGCGATCGT GCTGGTCAAG
GACTCATCGT TGCTGTCGCT GATTTCAGTC TTGGAGTTGA CACGTGCCGG GCAGACCTTG
GCCAATGACC GGTTCATGCC GGTGGAAGGC TTGGCAACCA CTGCGGTGGG CTACCTGATC
ATTTATTTTG GACTGAAATT GATGGCAGCC GCATGGATGC GCATCAATCA TCCATCCGAG
CGCCACTGA
 
Protein sequence
MLLNLNFRVI GETLPEFWVG FVSTLSISLT AFAGAIAIGI IACAMSIQPS RLVRAPAVAY 
VDVIRATPLL AQLYFLYFGL PSFGVIMPET VIGIIALSIN SGAYVSEIIR SGIMSIPHGQ
VEASASSGMN YWQQMRLIIL PQALRPMVSP LIGQAIVLVK DSSLLSLISV LELTRAGQTL
ANDRFMPVEG LATTAVGYLI IYFGLKLMAA AWMRINHPSE RH