| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0233 |
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| Symbol | |
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| ID | 3962291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 232263 |
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| End bp | 232916 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637915068 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_521521 |
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| Protein GI | 89899050 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGCGT TCGCGTTAAA AGACCTGATT GAATTCGCGC CCATATTGGC GCAGGGCGCA
GTTGTGACCG TCGAGGTCTT TGCCTGCGGT CTGATCGTGG CCACGTTGCT CGGATTGGTC
TGGGCATTGA TGCGGGTTTC AGGAGTCGCG GCTCTGGCCG TATTCTCGAA GGGATTGATC
AACACCATTC GGGGCATCCC GATCCTGGTG CAGCTGTTTT TTATCTACTT CGTGCTTCCC
GACGTCGGCA TCCAGCTGAG CGCATTCCAG GCCGGTTTCA TCGGACTGGG GTTCGCCTAT
TCCTGCTATA TGGCTGAGGT TTTTCGCGGC GGGATCGAAG CGGTCGATCC CGGACAAGTC
GAGGCCGCGA AATCGCTCGG TATGGGGCGG GCAATGACAA TGTGGCGCGT GGTACTGCCG
CAGGCATTCA AGGTTGCGCT GCCACCCTAC GGCAACACCT GCATCATGCT CATCAAGGAC
ACCTCGCAAG CCTCAATCAT CACCGTGACT GAGTTGACCT TTCAAAGCAA GGTCATCGCC
GCGTCGACGT TCAAGAATGC CGAAGTTTTT ACCTTGGTCG CATTGTTCTA CTTGCTACTG
TGCATACCGC TGATCATGAT TGTCGGTCGG CTTGAGAAGA GGTTTGGACG CTGA
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| Protein sequence | MAAFALKDLI EFAPILAQGA VVTVEVFACG LIVATLLGLV WALMRVSGVA ALAVFSKGLI
NTIRGIPILV QLFFIYFVLP DVGIQLSAFQ AGFIGLGFAY SCYMAEVFRG GIEAVDPGQV
EAAKSLGMGR AMTMWRVVLP QAFKVALPPY GNTCIMLIKD TSQASIITVT ELTFQSKVIA
ASTFKNAEVF TLVALFYLLL CIPLIMIVGR LEKRFGR
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