| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0224 |
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| Symbol | |
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| ID | 3960130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 223456 |
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| End bp | 224937 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637915059 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_521512 |
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| Protein GI | 89899041 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGTCG TCGGTGCAGG CATCATGGGT GTCGGCATTG CGCAGGTTGC AGCGCAAGCG
GGACACACCG TGCTGCTGTT TGATGCCCGA GACGGTGCCG CCGAACAGGC CAGGGAGAAA
CTTGCCAAGA CCTTCGAGGG CTTGGTGGCC AAGGGCAAAC TCAGCGCTGA CGATGCGGCA
CAAACCCTCT CACGCATTGA GCCCATCGCG TCGCTGGACG CGGCCGCGGG CGTGCGCCTG
GTGGTGGAAG CCATCGTTGA AAAACTCGAC GCCAAGCGCG GTCTGTTCCA GCAACTGGAA
GCCATCATCG CGACTGACTG CGTGCTGGCC AGCAACACCT CGTCGATCTC GGTCACGGCC
ATTGCCAATG GCTTGCAGCA TCCGCAGCGG CTGGTGGGCA TGCATTTCTT CAACCCGGTG
CCACTGATGA AGCTGGTGGA AGTGGTGTCG GGCTTGCAAA CCGCAGCGGC AGTGGCCGCG
GCCATTTTTG ACTTGTCCAA AGACTGGGGC AAGGTGCCCG TGTCTGCGCG CTCCACGCCG
GGCTTTATCG TCAACCGCAT TGCCAGGCCT TACTACGCTG AGGCGCTGGC CTTGTTGCAA
GAGCAGGCTG CTGCGCCCGC CGTGCTCGAT GCCTGCTTGC GCGCAGCGGG TTTCCGCATG
GGGCCGTGTG AGTTGATGGA CCTGATCGGG CATGACACCA ATTTCTCGGT GACGCAATCG
GTGTTTGAGG CCAATTTTTA TGACAAACGC TACGTGCCCT CACTGGTGCA GCGTGAGTTG
GTCGATGGTG GCCTGCTGGG TCGCAAATCG GGACGCGGCT TTTACGACTA CGCTGAAGGT
GTGAGTGCCC CGGAACTCGA GACGGTGGAG CCCGTGTTGT TGCCCACAGC GCAGTTGTTG
CGTGTGTATG GTCAAGGGCC GGTGGCGGAT CGTTTGGCGG CATCGCTGGT GCAAGCCGGG
CAAGCATTTT TGCGCGTACC CAGCAGCGAT TGGGTGGGCC TGGGCGTGGA AGGTGCGCAG
TTGCGCCTGA CCGACGGACG CACCGCCACC CAGCTCGGCG TGGAAGTGGC GGTGTTTGAC
CTGCCCTTGA ACGGGGCATC GGGTGCGGCG CTGGCCTGGG CACCGTCGCT GCGGGCCTCG
TCCGCCTGGA CACGTGCGGC CCCGCGCTGG CTCGCCACGC TGGGCTTTAA GCCGCAGCGT
GTGGCCGATG CGCCGGCGCT GGTGGTGGCA CGCACCTTGG CCATGCTGAT CAACGAAGCT
GCCGACGCGG TGCAGCAAGG TGTTTGCACC CAAGACGGTG CAGATGCCGC CATGAAGCTG
GGCGTGAACT ACCCCGCTGG CCCGTTCGAG TGGCTGGCGC AGTGGTCTAC CCCCGCCGTG
TTGGGCGTGC TGGACGCGCT GGATAACCAC TACCGGGGTG AGCGTTACCG CGTCAGCCCC
TGGCTGCGTC AGCGCCCGTG GATGGACTCC GAAGCATCAT GA
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| Protein sequence | MLVVGAGIMG VGIAQVAAQA GHTVLLFDAR DGAAEQAREK LAKTFEGLVA KGKLSADDAA
QTLSRIEPIA SLDAAAGVRL VVEAIVEKLD AKRGLFQQLE AIIATDCVLA SNTSSISVTA
IANGLQHPQR LVGMHFFNPV PLMKLVEVVS GLQTAAAVAA AIFDLSKDWG KVPVSARSTP
GFIVNRIARP YYAEALALLQ EQAAAPAVLD ACLRAAGFRM GPCELMDLIG HDTNFSVTQS
VFEANFYDKR YVPSLVQREL VDGGLLGRKS GRGFYDYAEG VSAPELETVE PVLLPTAQLL
RVYGQGPVAD RLAASLVQAG QAFLRVPSSD WVGLGVEGAQ LRLTDGRTAT QLGVEVAVFD
LPLNGASGAA LAWAPSLRAS SAWTRAAPRW LATLGFKPQR VADAPALVVA RTLAMLINEA
ADAVQQGVCT QDGADAAMKL GVNYPAGPFE WLAQWSTPAV LGVLDALDNH YRGERYRVSP
WLRQRPWMDS EAS
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