Gene Rfer_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0223 
Symbol 
ID3960129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp222635 
End bp223432 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID637915058 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_521511 
Protein GI89899040 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTTT GGGAAACCTT GGTGCTGTCG CAACGCGCCC CGGGCGTTGC GCAGGTCACG 
ATGGCGCGTC CGGCGGTGTT CAACGCTTTT GACGAGACCA TGATCACCGA GTTGGGCGAG
GTTTTCACCG AACTGGCCGA TGATGCCAGC GTGCGCGTGG TGGTGCTGGC CGGTGATGGC
AAGCACTTCA GCGCCGGAGC CGATCTGCAG TGGATGCAGC GTGCCAGCGC GGCCTCGACG
CAGTGGAATT TGCAGGATGC GCGCCGCTTT GCCGCCATGC TGGCCGGTAT TGAAAATTGC
CCCAAGCCCA CCGTGGCGCG CATCCAGGGC GCGGCGCTTG GCGGTGGGGT TGGTCTGACC
TGCGCCTGCG ACATCGCCAT TGCAACTGAG AACGCCTACT TTGCCGTCAG TGAGGCCAAG
TTTGGCATCC TGCCCGCCGT GATTGGCCCC TACCTTGTCA ACGCGGTTGG CAAGCGCCAG
GCCAAACGGC TGGCGCTGAC CACCACCCGC ATCACTGCCG CCCAAGCGCA GGTCATGGGC
CTGGTGCAGC AAGTAGTTGC AGGTGACGCG CTGGATGTCG CCGTGGATGC CAGCGTCACC
GAGCTACTGG CCGGCGGCCC GCAGGCACAA AGCGAGATCA AGCAGCTGTA TGCGCAACTG
GAGGTCGGCC CTGTCAGCGC CGAGGTGCGC GAGCTGACGG CACAAACCAT CAGCCGGGTG
CGTGGCACCG ACGAAGCCCG CGAAGGCTTT GCCGCCTTTC TGGGCAAGCG AGCCGCCAAC
TGGATTCCAA AAGCATGA
 
Protein sequence
MRVWETLVLS QRAPGVAQVT MARPAVFNAF DETMITELGE VFTELADDAS VRVVVLAGDG 
KHFSAGADLQ WMQRASAAST QWNLQDARRF AAMLAGIENC PKPTVARIQG AALGGGVGLT
CACDIAIATE NAYFAVSEAK FGILPAVIGP YLVNAVGKRQ AKRLALTTTR ITAAQAQVMG
LVQQVVAGDA LDVAVDASVT ELLAGGPQAQ SEIKQLYAQL EVGPVSAEVR ELTAQTISRV
RGTDEAREGF AAFLGKRAAN WIPKA