Gene Rfer_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0215 
Symbol 
ID3960121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp212519 
End bp213334 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID637915050 
Productalpha/beta hydrolase 
Protein accessionYP_521503 
Protein GI89899032 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.296554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG CCTTTGCTTT CGTCGAAGTC GATTGGGCCG GGCGCACGGT GTGCATTGAG 
CACCGATGGA TTGCCCCCGA GCGCACCACC GCACCACTGA TCGTGTTTCT GCACGAGGGA
CTGGGCTCGC TGGCGATGTG GAAGGACTTT CCGCAGCGCC TTTGTGATGC GGCGCTCTGC
CGTGGCCTGG TGTACTCGCG CCCCGGCTAT GGCCGCTCCA CGCCGCGCGC GGCACAGGAG
GCCTGGGGCC TGGACTTCAT GCACCAGCAG GCGCATGTTG TGCTGCCAGC TTTCCTGCAC
GCGGTGGGCA TCGACCCGGT GGCGCAAGCG CCCTGGCTGT TGGGTCACAG CGACGGCGCC
TCGATTGCAC TCTTGTATGC AGCCCAATTT GCGCAGGCGA TTGCCGGGGC TATTGTGGTC
GCACCGCACA TTCTGGTTGA AGAGCTGTCG CTGACCAGCA TCGCGGCGGC ACGCACGGCC
TACCTGGAAA CCGATCTGCG CCAACGCCTG GCCAAGTACC ACGACGACCC CGATTCCGCC
TTTTGGGGCT GGAACAACAT CTGGCTGCAC CCGCCGTTCC GTGAATGGTC CATCGAAGCC
GAGATCGAAG CCATCCGCTG CCCACTGCTG GCGGCACAAG GCATGGACGA CGAATACGGC
ACGCTGGAAC AGATTCATGG CATCGCCCGA CGGGTGCCGC AGACCGAGTT GCTTGAATTG
AGCGACTGTG GCCATTCCCC GCATCGCGAT CAGGCCGAGC GCCTGATCGC TGCTGCCAGC
GCTTTCATCA CACAACAAAC AGGAGACAAA CCATGA
 
Protein sequence
MSEAFAFVEV DWAGRTVCIE HRWIAPERTT APLIVFLHEG LGSLAMWKDF PQRLCDAALC 
RGLVYSRPGY GRSTPRAAQE AWGLDFMHQQ AHVVLPAFLH AVGIDPVAQA PWLLGHSDGA
SIALLYAAQF AQAIAGAIVV APHILVEELS LTSIAAARTA YLETDLRQRL AKYHDDPDSA
FWGWNNIWLH PPFREWSIEA EIEAIRCPLL AAQGMDDEYG TLEQIHGIAR RVPQTELLEL
SDCGHSPHRD QAERLIAAAS AFITQQTGDK P