| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0039 |
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| Symbol | |
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| ID | 3960468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 43214 |
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| End bp | 43738 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637914878 |
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| Product | periplasmic protein thiol |
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| Protein accession | YP_521332 |
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| Protein GI | 89898861 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.564331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA AGCTGATTCC GCTGGGGATC TTTGCTGTTT TGGTCGTGTT TCTGGCGATT
GGCCTGACGC GGGACCCGCA CGAGATTCCA TCACCGCTGA TCGGCAAGGC GGCGCCGATG
TTCAACGCCC CGCTACTGCA GACGCCCGAG CAGCAGTTTT CTGCCAAAGA CATGCTGGGC
CAGGTCTGGC TGCTCAATAC CTGGGCGTCC TGGTGCGTCG CCTGCCGGCA GGAACACCCC
ATCTTGATGG AATTTGCCAA GACCAAAACG CTACCTATCG TCGGCCTGGA CTACAAAGAC
CAGAACCCGG AGGGCCTGAA ATGGCTGGCC CGCTTTGGCA ACCCTTACGA CCACGCCATT
ACCGACAAAG ATGGACGCAT TGGCATTGAC TTTGGCGTCT ACGGCGTACC CGAAAGCTTT
CTGATCGACA AGGCCGGTGT GATTCGCTAT AAGCAGATCG GCCCGGTCAC CGAAGAAGCC
TTGCGGGACA AGATCGTGCC GCTGATACGG GAGCTACAAA AATGA
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| Protein sequence | MKKKLIPLGI FAVLVVFLAI GLTRDPHEIP SPLIGKAAPM FNAPLLQTPE QQFSAKDMLG
QVWLLNTWAS WCVACRQEHP ILMEFAKTKT LPIVGLDYKD QNPEGLKWLA RFGNPYDHAI
TDKDGRIGID FGVYGVPESF LIDKAGVIRY KQIGPVTEEA LRDKIVPLIR ELQK
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