| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0001 |
|---|
| Symbol | dnaA |
|---|
| ID | 3960237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 7 |
|---|
| End bp | 1419 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637914840 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_521294 |
|---|
| Protein GI | 89898823 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000852444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGG GACAATACGC CAACCATCCC GACTTCAAGG GCACTGGCGA TGGACAAAGC
CTGTGGCAAA CGTGTGTTGA TCAACTGGCG CAGGAACTCC CGGAACAGCA GTTCAACACC
TGGATCAAAC CACTATCGGC GCAGGTCACA GACGACCTTG CCCAAATCAC CATCTTTGTT
GCCAACCGGT TCAAGCTGGA TTGGATCAGA GCCCAATACA GCAAACGTAT CACCAGCCTG
CTGGAAATGT TTTCGGGCCA AACCATACAT TTGGAGTTAG CGCTTGCTCC CCGCGAGATT
TTTGTCAGGA GCCAACTTAC TCATCGTTCG ATGGAACCCA TTCCGATGGA CGGCGTGGCC
GAATTGGGAG AGGACCGAAA CCCGAGCAGT CTTAAAAACC GGCTCAACAC GGCCCTGACC
TTCGACACCC TGATTGAAGG GACCGCTAAC CGCATGGCAC GTGCAGCGGC GATGCACGTC
GCGGGCATGC CGGGACACCT GTACAACCCG CTTTTCATCT ACGGCGGTGT TGGCTTGGGC
AAGACTCATT TGATGCACGC CGTCGGCAAT CGGCTGCTGG CTGATCAGCC AAATGCCAAA
GTTCTCTACA TCCATGCCGA GCAATTTGTA TCTGATGTGG TTAAGGCTTA TCAGCGCAAG
ACTTTTGATG AATTTAAAGA GCGTTACCAC TCACTGGATT TGTTGCTGAT TGATGACGTC
CAGTTTTTTG CCAATAAAGA ACGTACGCAA GAAGAATTTT TCAACGCCTT CGAGGCTTTG
CTGGCCAAAA AGTCGCACAT CGTGATGACC AGCGACACTT ATCCGAAAGG CCTGACGGAC
ATCCATGAAC GCCTGGTGTC ACGCTTTGAT TCCGGACTGA CGGTGGCGAT CGAACCCCCC
GAGCTGGAAA TGCGGGTCGC TATTTTGATC AACAAGGCAC GGGTTGAGGG CATTGTGATG
CCGGAAGAGG TGGCTTTTTT CGTGGCCAAG AATGTGCGCT CCAATGTGCG CGAACTCGAA
GGCGCGTTAC GCAAAATTCT GGCCTACTCC CGGTTCAACC AGAAAGATAT CTCGATCTTG
CTGGCACGCG AGGCGTTGCG CGACCTGCTC TCGATCCAGA ATCGCCAGAT TTCAGTCGAA
AACATCCAGA AAACTGTGGC TGACTACTAC AAGATAAAAA TTGCGGATAT GTACTCCAAG
AAACGGCCGG CCAGCATCGC CCGGCCGCGC CAGATTGCCA TGTACCTGGC CAAGGAACTG
ACACAAAAAA GTCTTCCCGA AATTGGCGAA TTGTTTGGTG GACGCGACCA CACCACTGTC
TTGCATGCGG TCCGAAAGAT CGGCGGTGAG CGCCAGCAAA TGACCGAGTT GAACCAGCAG
CTTCATGTGC TGGAGCAGAC GCTCAAAGGC TGA
|
|---|
| Protein sequence | MTEGQYANHP DFKGTGDGQS LWQTCVDQLA QELPEQQFNT WIKPLSAQVT DDLAQITIFV
ANRFKLDWIR AQYSKRITSL LEMFSGQTIH LELALAPREI FVRSQLTHRS MEPIPMDGVA
ELGEDRNPSS LKNRLNTALT FDTLIEGTAN RMARAAAMHV AGMPGHLYNP LFIYGGVGLG
KTHLMHAVGN RLLADQPNAK VLYIHAEQFV SDVVKAYQRK TFDEFKERYH SLDLLLIDDV
QFFANKERTQ EEFFNAFEAL LAKKSHIVMT SDTYPKGLTD IHERLVSRFD SGLTVAIEPP
ELEMRVAILI NKARVEGIVM PEEVAFFVAK NVRSNVRELE GALRKILAYS RFNQKDISIL
LAREALRDLL SIQNRQISVE NIQKTVADYY KIKIADMYSK KRPASIARPR QIAMYLAKEL
TQKSLPEIGE LFGGRDHTTV LHAVRKIGGE RQQMTELNQQ LHVLEQTLKG
|
|---|
| |