| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C5898 |
|---|
| Symbol | |
|---|
| ID | 3607592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007336 |
|---|
| Strand | - |
|---|
| Start bp | 16190 |
|---|
| End bp | 17203 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637688800 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_293098 |
|---|
| Protein GI | 72383744 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.585031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAG CGTCCAGGGC AGGAAGTCGC GCACTTGTAC TACTGACTGA TCCCATCGTT
CCGGAGGCGC ATGCTCGACT GGCGGCTAAC GCTGACGTCG AGTTACTGCC CCCGGGACTG
ACCGGCGCGG CAAGTGATCA AGCCCTTCGA GACCGTATTG CGAAGGTCGA CGGTCTGATC
GTACGGCGAC AGCTCCCTGG CGATCTGTTC GAGCGCGAGC ATCGTCTTCG TGCCGTCGTT
CGTCATGGTG TTGGCGTGGA CTTCATCCCG GTAGATCGCG CAACGGCTCA CGGCATCCCG
GTGGCCAATA CGCCGGACAC GAACTCGAAC GCCGTCGCCG AATATGCGAT AGCTGCCATG
CTCGCAATGA CTAGACGGCT GGCAACCTTC GACAAGGCCG TGCGTGACGG CGACTGGAAC
CGCCGCATGA TCGCGGGAGA GCAATCCAGG GAACTACGCG GCTCCACGCT GGGAATCATT
GGCTTCGGTG CCATCGGCCG CCGAGTCGCG GAGATCGCAG GCGCAGGCTT CGCGATGAAG
TTGCTTGCGC ATACGTCGAC ACCATCCAAG CTCCCGCCAC ACGTCACCCC GGCAGAACTC
GCCGACCTGT TCGCCCGCAG CGATTACATC GTACTCGCGT GCCCGCTTAC CAAAGCAACA
AGAGGCATGG TGAATAAGGC GCTCCTGGCG CACGCGCGTC CGACTACCGT GCTCGTCAAT
GTGGCACGCG GGCCAATCAT CCAGCAGGCG GATCTGATCG ACGCCTTGAG CAGCGGCACC
ATTGGTGGGG CTGTACTCGA TGTATTTGAA CAACATCCGC TTCCGGACGA CAGCCCGCTT
CGAGCTTTAC AGAACGTCCT TTTGACACCG CATATCGCCG GCTTGACCCA AGACGCCTCC
ATGGCCATGG GCCTGGCCGC CGCCGACACG ATGCTCGCCC TGCTGCAAGG CGAACGACCA
CGCAACATCG TCAACCCCGA ATTCAACGCC GTAAATCAGG AGACAACCAA ATGA
|
|---|
| Protein sequence | MTQASRAGSR ALVLLTDPIV PEAHARLAAN ADVELLPPGL TGAASDQALR DRIAKVDGLI
VRRQLPGDLF EREHRLRAVV RHGVGVDFIP VDRATAHGIP VANTPDTNSN AVAEYAIAAM
LAMTRRLATF DKAVRDGDWN RRMIAGEQSR ELRGSTLGII GFGAIGRRVA EIAGAGFAMK
LLAHTSTPSK LPPHVTPAEL ADLFARSDYI VLACPLTKAT RGMVNKALLA HARPTTVLVN
VARGPIIQQA DLIDALSSGT IGGAVLDVFE QHPLPDDSPL RALQNVLLTP HIAGLTQDAS
MAMGLAAADT MLALLQGERP RNIVNPEFNA VNQETTK
|
|---|
| |