| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4891 |
|---|
| Symbol | |
|---|
| ID | 3614461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 1613808 |
|---|
| End bp | 1615811 |
|---|
| Gene Length | 2004 bp |
|---|
| Protein Length | 667 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637694318 |
|---|
| Product | cytochrome-c oxidase |
|---|
| Protein accession | YP_299083 |
|---|
| Protein GI | 73538716 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.271265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGC GATCCGAACT CGCCACGCTT ATCTTCGGCC GCCTGAGCTG GGAGGCCATA
CCGCTGCACG AGCCGATCCT GCTGGGCACC TTCATCGTCG TGGTCATCGG CGGACTCGCG
TTGCTGGGCG CGGTGACCTA TTTCCGCCTG TGGGGCTATC TGTGGCGCGA GTGGTTCACC
AGCATCGACC ACAAGAAGAT AGGCATCATG TACGTGATCC TGGGGATCAT CATGCTGCTG
CGGGGTTTTG CCGACGCCGT CATGATGCGC ATGCAGCAGT CGGTGGCCTT TGGCGATAAC
CTCGGCTTCC TGCCGCCCCA CCACTACGAC CAGATCTTCA CCGCGCACGG CGTGATCATG
ATCTTCTTCG TGGCCATGCC GCTGGTGACG GGGCTGATGA ACTTCGTGGT GCCACTGCAG
ATTGGCGCGC GCGACGTGGC CTTCCCCTTC CTCAATAACT TCAGCTTCTG GATGACCACC
GGCGGCGCCG TGCTGGTGAT GATGTCGCTG TTCGTCGGCG AGTTCGCGCG CACCGGGTGG
CTCGCATATC CGCCGCTGTC GGGCATCGTC CATAGCCCGG ATGTTGGCGT CGACTATTAC
CTCTGGTCAT TGCAGGTGGC GGGGGTCGGG ACCGTGCTGT CCGGCATCAA CCTGATGGTC
ACCATCATCA AGATGCGCGC GCCCGGCATG ACGCTGATGC GCATGCCGAT CTTCACGTGG
ACCGCACTGT GCGCCAACGT GCTGATCGTG GCCGCGTTCC CCGTGCTGAC CGCGGCACTG
GCCATGCTGG CGCTCGACCG CTACCTCGGC ATGAATTTCT TCACGGCCGA TCTTGGTGGC
AGCGCCATGA TGTACGTGAA CCTGATCTGG ATCTGGGGGC ACCCGGAGGT GTACATCCTG
GTCCTGCCAG TATTCGGCGT GTTTTCCGAG GTGGTTTCCA CGTTCTGCCA GAAGCGGCTG
TTCGGCTACG CGTCGATGGT CTATGCCACG GTCGTGATTA CCGTGCTGTC CTACCTGGTC
TGGCTGCACC ACTTCTTCAC GATGGGGTCG GGGGCGAGCG TCAACTCGTT CTTCGGCATC
ACGACGATGA TCATCTCGAT CCCGACCGGG GCGAAGCTGT TTAACTGGCT GTTCACGATG
TACCACGGCC GCATCCGCTT CGAGGTGCCG ATGCTGTGGA CCGTCGGCTT CATGGTCACC
TTCGTGATTG GCGGCATGAC CGGCGTGCTG CTGGCCGTCC CGCCCGCCGA CTTCTCGCTG
CACAACAGCC TGTTCCTGAT TGCCCATTTC CACAACGTGA TCATCGGCGG CGTGCTGTTC
GGGCTGATGG CCGGGATCAC GTACTGGTTC CCGAAGGCCT TCGGCTACAA GCTCGAGCCG
TTCTGGGGCA AGTGCTCGTT CTGGCTCTGG CTGGTGGGCT TCTACTTCGC GTTCATGCCG
CTGTACGTGC TTGGCATGAA GGGCGTGACC CGCCGCATGA GCCATTTCGA AGACCCGTCG
CTGCAGGTCT GGTTCCTGCT CGCGGCGTTC GGCGCGTTCC TGATCGCGCT CGGTATCGGC
TGCTTCCTGA TCCAGCTGGT GGTCAGCTTC ATCAACCGCG AAGCGCTGCG CGACGTCACC
GGCGATCCGT GGGATGGCCG CACGCTGGAA TGGTCCACGT CATCGCCACC GCCTGCCTAC
AACTTCGCCT TCACGCCGAT CGTCCATGAC ACCGACGCAT GGTGGCAGAT GAAGGCGCAT
GGCTACGAGC GTCCGGCGCA GGGCTTCATA CCGATCCACA TGCCCAAGAA TACGGGCGCC
GGCATCATCC TGGCGGGGCT TGCCACGGTC TGCGGGTTCG CGCTGATCTG GCACATCTGG
TGGCTGGTGG TGCTGGCGTT CGGCGCCACG ATTGTCTCGG CGCTCGTGCA CACCTTCAAC
TACAAGCGCG ACTACTACAT CCCGGCCGAT ACGGTCGGCA ACACGGAGGC GGCGCGCTCG
GCGCTGCTGA CCCGCCATGC CTGA
|
|---|
| Protein sequence | MQERSELATL IFGRLSWEAI PLHEPILLGT FIVVVIGGLA LLGAVTYFRL WGYLWREWFT
SIDHKKIGIM YVILGIIMLL RGFADAVMMR MQQSVAFGDN LGFLPPHHYD QIFTAHGVIM
IFFVAMPLVT GLMNFVVPLQ IGARDVAFPF LNNFSFWMTT GGAVLVMMSL FVGEFARTGW
LAYPPLSGIV HSPDVGVDYY LWSLQVAGVG TVLSGINLMV TIIKMRAPGM TLMRMPIFTW
TALCANVLIV AAFPVLTAAL AMLALDRYLG MNFFTADLGG SAMMYVNLIW IWGHPEVYIL
VLPVFGVFSE VVSTFCQKRL FGYASMVYAT VVITVLSYLV WLHHFFTMGS GASVNSFFGI
TTMIISIPTG AKLFNWLFTM YHGRIRFEVP MLWTVGFMVT FVIGGMTGVL LAVPPADFSL
HNSLFLIAHF HNVIIGGVLF GLMAGITYWF PKAFGYKLEP FWGKCSFWLW LVGFYFAFMP
LYVLGMKGVT RRMSHFEDPS LQVWFLLAAF GAFLIALGIG CFLIQLVVSF INREALRDVT
GDPWDGRTLE WSTSSPPPAY NFAFTPIVHD TDAWWQMKAH GYERPAQGFI PIHMPKNTGA
GIILAGLATV CGFALIWHIW WLVVLAFGAT IVSALVHTFN YKRDYYIPAD TVGNTEAARS
ALLTRHA
|
|---|
| |