| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4547 |
|---|
| Symbol | |
|---|
| ID | 3614739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 1223650 |
|---|
| End bp | 1225320 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637693976 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_298741 |
|---|
| Protein GI | 73538374 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0908744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGA CGCTGCCGCC AGACATCATG GAGATCCTGC GGGATCAGTT TGGCGTCGCA
CGCCTGCGCC CCGGGCAGGC TGACGTCCTG GCCAGCGTGC TGCAGGGCCA CGACACGATC
GCTGTCATGC CGACCGGGAG TGGAAAGTCG CTGTGTTTCC AGCTGCCTGC CCGCGTACTG
GACGGCCTGA CGGTGGCGAT ATCGCCGCTG ATCGCATTGA TGCAGGATCA GGCCGGCAAG
CTGGACCAGC TCGATTTGCC GCCCGCGGTG GTCAACAGTG CCGTGGGCGA CGCGGCGCTG
GACAGTCTCG CGCGCGGCGG CGAGCGCATC CTGTTGACGA CGCCCGAGCA GCTCGAAGGC
AAGGCCGTCA TTGAAGCGCT GCGCCGCAAC CGCGTTGCAT TGTTCGTGGT CGACGAGGCG
CACTGCATTT CGCAATGGGG CCACGATTTT CGGCCCGCAT ACCTCGGATT GCGGGAGGTC
GTGTCGGCGC TGTCGCGGCC GCCGGTACTG GCGCTGACCG CCACGGCGAC CGACGCCGTC
GTCAAGGACA TCGCGCACCA CCTCGGCATG CGCCATCCGC GTGTCGTGCG TGCGCCGCTG
TTTCGGCCCA ACCTTGTCTA TGCCGTCGAG CATCTGTCGG AGGCGCCCAC GCGGCCTGAT
GCGGTACGCC GCCTGGTTTC GGCCGAAAGC GGTGGAAGCG GTGGAAGCGG CAGGAGGGGT
GCAGGCATCG TCTACACTGC GACGGTCGCG CTGGCGGAAC AGTTGTACGA TGCACTGCGG
GGTGCAGGCA TGAACGTCGC GCTGTATCAC GGCCAGCGCA CCGCGGTGCA ACGCCGCGAC
GCGCAGGACG CTTTCATGGC GGGGCGCGCG GACGTGATGG TGGCGACCAA TGCCTTTGGC
ATGGGGATCG ACAAGCCCGA CGTCCGGTTC ATCGTTCATG CGCAATGTCC CGGCAGCCTG
GATGCCTATT ACCAGGAGTC CGGAAGAGCA GGGCGCGACG GCGGGTTGGC GCGCTGTACG
CTGCTGTTCG ACGAGAAGGA CAAGCGCATC CACCAGTTCT TTCTTGCTAA CCGTTACCCG
GCCGCGACGG ACCTGCGGCA GATGGTGACG GCGCTCAGGG GCACGCCAAC GGTCCTGCCG
GCGTTGCGAG AGGCACTTCC CCACATCGGT GTGCGGCGCT TGCAGTCAGG CATGCGGATG
CTTGGCGATT TTGGCATCGT GCAGCGCGAT CGCCGAGGGC GCTTCTCGCT GCGCGATGGC
AGTGCCGACA GCATCGAAGA CATCGCCGCC CTGTACGAGG CCCGCAGTCG TGAGGACCGC
GAAACCCTGC AGGCGATGCT CGATTACGCG CGCAGCGGGC GTTGCCGCTG GATGCTGCTG
CTCGAGTACT ACGGCGAATC CGAGGACCTG GAACCATGCG GCATCTGCGA CAGTTGCCGG
CGCTTGGCGG AGGCTGCCAC ACATGAGGCT GACGGCGAGA AGACGGTGGC TGCCAGCGCG
ACAGCCGTGC CGTTCGCCGA AGGCGACACG GTAAAGGCGC GCCGGTTCGG CAAAGGCACG
GTGGTGTCAG TTACCAGTGA ATGGGTGGAA GTCCGCTTCC CCGATGAGAG CGTGCGCCGC
TTTCTGCCGG ATCGCCTGCT TCGCATGGGC AAGCGCCGTG GCGCCGCGTA G
|
|---|
| Protein sequence | MPETLPPDIM EILRDQFGVA RLRPGQADVL ASVLQGHDTI AVMPTGSGKS LCFQLPARVL
DGLTVAISPL IALMQDQAGK LDQLDLPPAV VNSAVGDAAL DSLARGGERI LLTTPEQLEG
KAVIEALRRN RVALFVVDEA HCISQWGHDF RPAYLGLREV VSALSRPPVL ALTATATDAV
VKDIAHHLGM RHPRVVRAPL FRPNLVYAVE HLSEAPTRPD AVRRLVSAES GGSGGSGRRG
AGIVYTATVA LAEQLYDALR GAGMNVALYH GQRTAVQRRD AQDAFMAGRA DVMVATNAFG
MGIDKPDVRF IVHAQCPGSL DAYYQESGRA GRDGGLARCT LLFDEKDKRI HQFFLANRYP
AATDLRQMVT ALRGTPTVLP ALREALPHIG VRRLQSGMRM LGDFGIVQRD RRGRFSLRDG
SADSIEDIAA LYEARSREDR ETLQAMLDYA RSGRCRWMLL LEYYGESEDL EPCGICDSCR
RLAEAATHEA DGEKTVAASA TAVPFAEGDT VKARRFGKGT VVSVTSEWVE VRFPDESVRR
FLPDRLLRMG KRRGAA
|
|---|
| |