| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4540 |
|---|
| Symbol | |
|---|
| ID | 3614732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 1217392 |
|---|
| End bp | 1218420 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637693969 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_298734 |
|---|
| Protein GI | 73538367 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2855] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0584057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGC TTATCCGCAA GCCCATGAGT TGGCCCGCAG TGCGTCCGTA TCTGCCGGGC
GTGCTTATCA GCGCGGTGGT GACTGTGGCG GCGATGTCTC TCGCCGAGCA CTACCATGCC
CCCGTGATGC TGTTCGCGCT GCTGCTTGGC ATGGCCCTCA ACTTCCTGTC GCAGGAAGCT
TCGAGTGCGA TCGGCATCGA ATTCAGTGCC AAGCAGGTGC TGCGCCTCGG CGTGGCCCTG
CTCGGGCTGC GCATCACCGG CGCGCAGGTC GTGGCGCTCG GGTGGCACTC CATAGCCATG
ATCGTGCTGG CAGTCGCGCT GACGATCGTC TGCGGCATCC TGCTGGCACG GCTGATGGGC
TTCCAGATGT TCTTCGGCTT GCTGACCGGC GGCGCCGTGG CCATCTGCGG CGCTTCCGCG
GCGCTGGCCT TGTCGGCTGC CATGCCGCAG CACCCGATGA AGGAGCGGGC GACCCTGTTC
ACGGTGATCG GTGTGAGCAC GCTTTCCACG CTGGCGATGG TGCTCTACCC GATGCTCGCC
AATTTTCTGG CGCTGAACTC CGTGCAGGCC GGGGCCTTTC TCGGCGGAAC GATTCACGAC
GTGGCGCAGG TGGTGGGCGC CGGCTACAGC ATCTCGCATG AAGCCGGCGA CGCGGCCACG
CTGATCAAGC TGATGCGCGT CGCCATGCTG TTGCCCGTCA TTGCGCTCGC CGCGTGGCTT
TCGCAGCGCC ACCAGCGCGC GCAAGGCGAA ACCAGCACCG GTCCGCGCCC CCCGCTGCTG
CCCTGGTTCG CCGTGGCGTT CGCCGTGCTG GTGGCGATCA ACAGCACCGG CTGGCTGCCG
CCGGTGGTCG TGAAGGCCGG TCAGACGGCG TCTCAGTGGT GCCTCGTCAT GGCCATGGCC
GCGATCGGCA TGAAGACGCA CCTGAGGGAA GTCCTCACGG TGGGCTGGAA GCCCATCGTG
CTGATGGTGC TGGAGACGGT GTTCCTCGCC GTGCTGTTCT ACGGCATGCT GGTCTGGTTG
CAGCCGTAG
|
|---|
| Protein sequence | MAVLIRKPMS WPAVRPYLPG VLISAVVTVA AMSLAEHYHA PVMLFALLLG MALNFLSQEA
SSAIGIEFSA KQVLRLGVAL LGLRITGAQV VALGWHSIAM IVLAVALTIV CGILLARLMG
FQMFFGLLTG GAVAICGASA ALALSAAMPQ HPMKERATLF TVIGVSTLST LAMVLYPMLA
NFLALNSVQA GAFLGGTIHD VAQVVGAGYS ISHEAGDAAT LIKLMRVAML LPVIALAAWL
SQRHQRAQGE TSTGPRPPLL PWFAVAFAVL VAINSTGWLP PVVVKAGQTA SQWCLVMAMA
AIGMKTHLRE VLTVGWKPIV LMVLETVFLA VLFYGMLVWL QP
|
|---|
| |