| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4004 |
|---|
| Symbol | |
|---|
| ID | 3613263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 643718 |
|---|
| End bp | 645088 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637693439 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_298204 |
|---|
| Protein GI | 73537837 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.967061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCAT CTGCCAAGCT CAACGCTGAT TCGCTGGGCA TCGTCGAATC CGTGATCATG
GGCATCGCCG GCACGGCGCC GGCCTACAGC ATCGAGATCA CGACTTCCAC GATCATCGGT
ACGGCCGGCA CGCTGTCGCC GGCGAGCATC CTGGTGTGCG GGCTCATCAT GTTTGGCATC
GCATTTGCGT TCATCAACCT GAATCGGGCC CTGGCGAGCG CCGGCACTTC CTATGCGTGG
GTGAGCATGG TATTCGGGCG AGCCTTCGGC TTTCTTGCCG GTTGGGCGCT GCTGGTGCTG
TGCTGCGTGT TCATGGTCTC TGCCATGATT CCGGCGGCCA ATGCCACGCT GCTCGTTTTC
GACCGGCCGA AGATGAATAA CGTGCATTAC GTGACGCTGA TCGCGGCGGC ATGGCTCACG
TTCGTCAGTG CAGTGATCGT CAAGGGCATC AAGCTCACCA GTTACCTGCA AGTGCTGATG
ACAGTCATCG AGGGCGCGAT TCTGCTCGTG ATCATCATCG CGAGCTTCCT CACGTTTCCG
CATGCGCCAC AGCACCCGTT CTCGCTGGCA TGGTTCTGGC CGTTCGCGTT CTCTCCCGGC
ATGTTCGCCA ACTGCGCGCT GATCGCAATT TTCTTTTTCT ACGGCTGGGA CGTGACCCTG
AACCTCAGCG AGGAGACGCG CGACCCGAAC CGCATCCCGG GTCGCGCCGC GTTCTGGTCG
ATGGTGTTCC TGATGACGTT CTTCCTGGTC TTCATCGTCA TCACGCTGCT CGGCCTGTCG
GATGCCGAGA TCCAGCACTA CAACACCAAC GTCATCTTTG CCATTGCGGA GAAGTTGTTC
GGACCCACCT GGGGCTATGT CGCGATCATT GCGGTGCTGC TGAGCACAGT GGGAACGGTC
GAGACGCAGA TGCTCCAGTT CACACGCACA CTGTTTGCCA CGAGCCGCGA CGGGGCACTC
CACCATCGCT ACGCGCGCCT GCATCCGCGT TGGCGGACGC CGCACTTTGC CATCTTCTTC
ATCTGGATCG CCGGACTCGT GCTGCTGTTC GCTTCGTCTT ACCTGCCGAC GATCAACGTC
ATCCTGCAGG ATTCCATTAC CGCCATCGGT TTTCAGATCT GCTTCTACCT CGGGCTGACC
GGGCTCGCCT GCGGCTGGTA TTACCGATCG ATGCTGGCGC AAGGTCCATG GCATGCCGTT
AGCCACGTCA TCTGGCCGGT GGGAAGCGGG CTGTTCCTTT TCTTCATCGC GATCTACAGT
ATCCCGACTT TCGATTGGGT CACCAATGTC GTTGGCCTGG GAGGCATAGC CTGTGGTGCC
GTTCCGCTGG CGCTGAACCG CAGGAAGATC TGGGCATCTC CTGCCGCCTG A
|
|---|
| Protein sequence | MDPSAKLNAD SLGIVESVIM GIAGTAPAYS IEITTSTIIG TAGTLSPASI LVCGLIMFGI
AFAFINLNRA LASAGTSYAW VSMVFGRAFG FLAGWALLVL CCVFMVSAMI PAANATLLVF
DRPKMNNVHY VTLIAAAWLT FVSAVIVKGI KLTSYLQVLM TVIEGAILLV IIIASFLTFP
HAPQHPFSLA WFWPFAFSPG MFANCALIAI FFFYGWDVTL NLSEETRDPN RIPGRAAFWS
MVFLMTFFLV FIVITLLGLS DAEIQHYNTN VIFAIAEKLF GPTWGYVAII AVLLSTVGTV
ETQMLQFTRT LFATSRDGAL HHRYARLHPR WRTPHFAIFF IWIAGLVLLF ASSYLPTINV
ILQDSITAIG FQICFYLGLT GLACGWYYRS MLAQGPWHAV SHVIWPVGSG LFLFFIAIYS
IPTFDWVTNV VGLGGIACGA VPLALNRRKI WASPAA
|
|---|
| |