| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3470 |
|---|
| Symbol | |
|---|
| ID | 3612873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 8190 |
|---|
| End bp | 8978 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637692897 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_297672 |
|---|
| Protein GI | 73537305 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.698077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGCA TGGAAGGCAA GACGGCCATC GTGACCGGCG GTGCAACGAT GATTGGCGAG
GCGGTGGTTT CGGCCCTGAT TTCGGCAGGC GCGAACGTTG TTGTCGTTGA CATCGACCAG
GCAGGTGGCA ATCAGATTGC GCAGCGTCAT CCGTCGCGTT GCCGATTTGC CGCGGTGGAC
GTCACCAGCG ATGCGGACAT CGCGACCTGT ATCACCCGGA CCGTCGAGGC ATTTCACGGC
ATCGACCTGC TTATCAACTG TGCCTGCACG TATGTGGACA ATGGCGCCGA TTCCACCCGG
GAGCAGTGGC TGGATTCCTA CAACGTCAAT GTCGTCGGCG CGGCAATGAT GCTCAAGGCC
TGCGTGCCGG AGATGAAGAA GCGCGGCGGC GGAGCGGTCG TGAACTTTGC CTCGATCTCG
GCCGGCGTGG CGCAGTCTGG GCGTTGGCTG TATCCGATCA GCAAGGCCGC GATGCAGCAG
TTCACCCGCA GCGCGGCGCT TGACTTGGCC CCGGACAATA TTCGCGTGAA CTCGGTTTCG
CCGGGATGGA CGTGGTCCTC GGTCATCAGC GCTCTCAGCG GCGGCGACAA GGCAAAGGCC
GACAGTGTCG CCGCCGACTT CCATCCGCTC GGACGCCTCG GCAAGCCCGA AGAAGTTGCG
CAGGTTGTCC TGTTCCTGCT GTCCGACGCA GCCGCGTTCG TCACCGGTAC CGACTACGCG
TGTGATGGCG GCTATGGCGC GTTGGGACCG GAAGGCCGGC ATGCCGCCAT CCAACGCCTC
ATGGCGTAG
|
|---|
| Protein sequence | MQGMEGKTAI VTGGATMIGE AVVSALISAG ANVVVVDIDQ AGGNQIAQRH PSRCRFAAVD
VTSDADIATC ITRTVEAFHG IDLLINCACT YVDNGADSTR EQWLDSYNVN VVGAAMMLKA
CVPEMKKRGG GAVVNFASIS AGVAQSGRWL YPISKAAMQQ FTRSAALDLA PDNIRVNSVS
PGWTWSSVIS ALSGGDKAKA DSVAADFHPL GRLGKPEEVA QVVLFLLSDA AAFVTGTDYA
CDGGYGALGP EGRHAAIQRL MA
|
|---|
| |