| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3301 |
|---|
| Symbol | |
|---|
| ID | 3609120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 3609746 |
|---|
| End bp | 3611257 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637692727 |
|---|
| Product | transmembrane protein |
|---|
| Protein accession | YP_297504 |
|---|
| Protein GI | 73542984 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00618037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGG TCAACTGTCC TGGTTGCGGC GCGGAGGTCG CGTTCCGCTC CTCCGCAGCC
GTCATGGCCG TATGCGAGTA CTGCCATAGC ACGCTGGTCA AGGATGCCGA GTCGGTCAAG
GACATCGGCA AGATGTCGGC CGTGCTCGAA GACTACACGC CGCTGCAACT CAATACTTCG
GGCCAGTGGC AGGGGCAAGG CTTCACGCTG GTGGGGCGCA TCCAGCTGCG CTACGAAGCC
GGGTTGTGGA ACGAGTGGTA TCTGCTGTTC GACGACGGCA GCGACGGCTG GCTTGCCGAT
GCCTCGGGCC AGTACATGCT CACGCGACGC TTGTCGCCGG AACAGGCCAC GGCCGGACAG
TTCGATACGC CGCCTAAGTT CGAGGCCCTG CGTCCCGGTG ACAGCCTGTT CTTCGACAAG
CGGCGCTGGC TCGCCGGCGA CGTGCGCACC GCACGCTGCA CGGGCGGTGA AGGCGAACTG
CCGTTCGTCG TCGGCACGGG CTGGACTGCG CAAGTGGCCG ACTTCCGCGA CGAAGGCCGC
TTCCTGACGC TCGACTATGC CGACGGGTTT CCGCCGGCCG TCTACACGGG CGAGCTTGTC
ACGCTGGATC AGCTCAAGGC GCAACTGCTG CGCGGGGCGG ACGAAATCGG CCGCACGGCG
GACCGCTACC GCGGCAAGAC GGTATCGCTG GCCTGCCCAA ACTGCGGCAG CCCGATTGCC
TATCGCGCCG GCATGGCGAG CTTCGTCGTC TGCGGCAGCT GCCACAGCGA GGTGGACTGC
ACCACGTCCA CCGCCATTGT GCTGGAAAAG CACAAGGAAC TGGAGGCGCT CAAGACCAGC
CTCGCGCCCG GAGACACCGG CAATATCGGC GGTAAGCCCT ATACCGTGCT CGGGCTCATG
CAATGCACGG ACAACGACGA GGACGAGGCG TCCACGTGGG TCGAATACCT GCTCTTCAAC
GAAGAGCGCG GCATGTTCTG GCTCGTGGAG CAGGACAGCG GCTGGGACAA GGTCGAGGTA
CTCGATACCT GGCCGCGACT GTCGTCCGCC GACGTGGCGA CCTGGCAGGG CGGGCTCTTC
CGCAAGGGCT TCGACTATCG CAGCGAAGTG CTGTATGCCG CCGGCACCTT CAACTGGCGC
GTGCGCGTGG GCGACAGCAC GCAACTGACG GAGTTCGGCA ATCCGCAACA ACGCCTGACG
CGCGAGACTT CCGACACGGA AATCGTGTGG ACCCGCTCCG TCCCTGTGAC CCGTGTGCAG
GTGGCGCAAT GGTTCAAGGA CAACAAGGCG CTCGCCAAGG CCGCCACACG GCCGGACGCC
GCTACGCGCA AGACGCCCGA CAACTCCGAT CTCGCGTTCT GCCGCAAGGC CGCCAAGTGG
TACGCCATCG TGCTGGCGAT CCTCAACGTA CCGGTGGCGC TGTTCAGAGA CAGCGGCTGG
ATCACGCTGG TCTTCGCCAT GCTGCTGCTG TGGGCACCGC TGTGGCTCGT GGGCCGCTGG
TCAAAGGACT GA
|
|---|
| Protein sequence | MQQVNCPGCG AEVAFRSSAA VMAVCEYCHS TLVKDAESVK DIGKMSAVLE DYTPLQLNTS
GQWQGQGFTL VGRIQLRYEA GLWNEWYLLF DDGSDGWLAD ASGQYMLTRR LSPEQATAGQ
FDTPPKFEAL RPGDSLFFDK RRWLAGDVRT ARCTGGEGEL PFVVGTGWTA QVADFRDEGR
FLTLDYADGF PPAVYTGELV TLDQLKAQLL RGADEIGRTA DRYRGKTVSL ACPNCGSPIA
YRAGMASFVV CGSCHSEVDC TTSTAIVLEK HKELEALKTS LAPGDTGNIG GKPYTVLGLM
QCTDNDEDEA STWVEYLLFN EERGMFWLVE QDSGWDKVEV LDTWPRLSSA DVATWQGGLF
RKGFDYRSEV LYAAGTFNWR VRVGDSTQLT EFGNPQQRLT RETSDTEIVW TRSVPVTRVQ
VAQWFKDNKA LAKAATRPDA ATRKTPDNSD LAFCRKAAKW YAIVLAILNV PVALFRDSGW
ITLVFAMLLL WAPLWLVGRW SKD
|
|---|
| |