| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2017 |
|---|
| Symbol | |
|---|
| ID | 3611664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 2209954 |
|---|
| End bp | 2210979 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637691408 |
|---|
| Product | tRNA-dihydrouridine synthase A |
|---|
| Protein accession | YP_296225 |
|---|
| Protein GI | 73541705 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA GCCCCCGCCG CATCTCGGTT GCCCCGATGA TGGACTGGAC CGATCGCCAT
TGCCGCACCT TCCATCGCCA GCTCAGCCGC CATACCTGGC TGTACACGGA GATGGTGACC
ACTGGCGCGC TGCTGCATGG AGATGTGCCA CGGCACCTGG ATTTCAACGC CGCCGAGCAC
CCGGTGGCGC TGCAACTTGG CGGCAGCGAG CCAGCAGATC TCGCCGTAGC CGCTCGCCTT
GGCCAGCAGT GGGGCTATGC GGAAGTCAAT CTGAATTGCG GATGCCCGTC CGAGCGCGTA
CAGCGTGGTG CATTCGGCGC TTGCCTGATG GCCGAACCGC AACTCGTGGC CGACTGCGTG
AAAGCCATGC GCGATGCCGT GTCGATTCCC GTTACGGTCA AGCATCGCAT CGGCATCGAT
AAGGTCGAGC ATTACGGTTT CGTTCGGGAT TTTGTCGGAA CCGTGGCGCA GGCAGGCTGC
GAAACGTTTA TCGTCCATGC ACGCAATGCC ATCCTGAAGG GGTTGAGCCC GAAGGAAAAT
CGCGAGATCC CGCCGCTCCG CTATGAAGTT GCCTATCAGT TGAAGCAGGA TTTCCCGCAA
CTGGAGATCC TGATCAACGG CGGCATCGTC AGCTATGACG AAATGGCGAG CCACCTCGAG
AATGTCGACG GCGTGATGAT CGGCCGGGAG GCTTATCACC AGCCCTATGT GCTGGCGGAG
ATGGATGGCC GGTTCTACGG CGACGCGGAG GCGCCGGTGC GATCGCGGCT GGACGTGGAG
CTAGCCATGC AGCGCTATAT CGGCGAACTG GTGGAGCGCG GCGGTTACAT GGGCGCCGTC
ACGCGCCACA TGCTGGGCCT CTACCGCGGT GTGGCGGGTG GCCGCGGCTG GCGGCGCGTG
CTGTCAGACG CCAAGCGGAT GTCGGCGGCC CGCACGCATG CCAATGTGGA TGCGCTGTTC
GAAGAAGCGC GGTCCCATCT GCATGCTAAC GCCCCGCTCG AACCCGAGCA TCGCGCAGCC
GCATAG
|
|---|
| Protein sequence | MKVSPRRISV APMMDWTDRH CRTFHRQLSR HTWLYTEMVT TGALLHGDVP RHLDFNAAEH
PVALQLGGSE PADLAVAARL GQQWGYAEVN LNCGCPSERV QRGAFGACLM AEPQLVADCV
KAMRDAVSIP VTVKHRIGID KVEHYGFVRD FVGTVAQAGC ETFIVHARNA ILKGLSPKEN
REIPPLRYEV AYQLKQDFPQ LEILINGGIV SYDEMASHLE NVDGVMIGRE AYHQPYVLAE
MDGRFYGDAE APVRSRLDVE LAMQRYIGEL VERGGYMGAV TRHMLGLYRG VAGGRGWRRV
LSDAKRMSAA RTHANVDALF EEARSHLHAN APLEPEHRAA A
|
|---|
| |