| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1980 |
|---|
| Symbol | |
|---|
| ID | 3611626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 2168504 |
|---|
| End bp | 2171092 |
|---|
| Gene Length | 2589 bp |
|---|
| Protein Length | 862 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637691370 |
|---|
| Product | AAA ATPase, central region:Clp, N terminal |
|---|
| Protein accession | YP_296188 |
|---|
| Protein GI | 73541668 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.192819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTG ACAAACTGAC TACCCGGTTC CAGGAAGCGC TGGCTGATGC GCAAAGCCTG
GCACTGGCCA ATGACAACCA ATACATCGAA CCGCAGCACC TGCTGCGTGC GCTGATTGCG
CAGAACGACG GCGCAGCCAA GGCGCTGCTG CAGCGCGCCG GCGTCAACGT GAACGGCTTG
CAGACCGCGC TGGATGCGGC CATCAAGCGT CTGCCGCAAG TGCAGGGCAC CAGCGAGGTC
CAGGTGGGCC GCGATCTGGT CAATCTGCTT AACGCCGCCG AGAAAGAATC CATCAAGCGC
GGCGACCAGT TCATCGCCAG CGAGCTGTTC CTGCTTGCCG TGTCGGAAGA CAAAGGCGAG
GCCGGGCGCA TTGCGCGCGA GAACGGGCTG AACCGCAAGC CATTGGAAGC GGCCATCCAG
GCCGTGCGCG GCGGCGATGC CGTCAATAGC GCCGACGCCG AAACGCAGCG TGAGGCGCTC
AAGAAGTACA CCATCGACCT GACCGAGCGC GCTCGAATGG GCAAGCTCGA CCCGGTGATC
GGCCGCGACG ACGAGATTCG ACGTGCGATT CAGATCCTGC AGCGCCGCAC CAAGAACAAC
CCGGTCCTGA TCGGCGAGCC GGGCGTGGGC AAGACCGCGA TCGTCGAAGG CCTCGCGCAG
CGCATCGTCA ACGGCGAAGT GCCCGAAAGC CTGAAGAACA AGCGCGTGCT GGTGCTCGAC
ATGGCCGGCC TGCTGGCTGG CGCCAAGTAC CGCGGCGAGT TCGAGGAACG CCTGAAGGCC
GTGCTGAACG ATGTGGCCAA GGATGAAGGC CAGACCATCG TCTTTATCGA CGAGATCCAC
ACCATGGTCG GCGCCGGCAA GGCTGAAGGC GCGATCGACG CGGGCAACAT GCTCAAGCCG
GCGCTGGCGC GCGGCGAGCT GCACTGCATC GGCGCGACCA CGCTGGACGA GTACCGCAAG
TACATCGAAA AGGACGCCGC GCTCGAGCGC CGTTTCCAGA AAGTGCTGGT CGATGAGCCG
AGCGTGGAGG CGACCATCGC CATCCTGCGC GGCTTGCAGG AAAAGTATGA GCTGCACCAT
GGCGTTGAAA TCACCGACCC GGCCATCGTC GCTGCGGCGG AGCTGTCGCA TCGCTATATC
ACCGACCGCT TCCTGCCCGA CAAGGCCATC GACCTGATCG ACGAGGCGGC TGCGCGCATC
AAGATGGAAA TCGACTCCAA GCCGGAGGCG ATGGACAAGC TCGAGCGCCG CACCATCCAG
CTCAAGATCG AACGCGAGGC GGTCAAGAAA GAGACCGACG AAGCGTCGCT CAAGCGCCTG
GACCTGATCG AGCAGGAGAT CACGCGCCTG GAAAAGGAGT ATGCGGATCT CGACGAGATC
TGGAAGGCCG AAAAGGGCGC CGCTCAGGGT ACGGCTGCGC TGAAGGAAGA GATCGAGAAG
GTCAAGCTGG AGATCGCCAA GCTGCAGCGC GAAGGCAAGC TCGACAAGGT GGCGGAACTG
CAGTACGGCA AGCTGCCGGG CCTGGAGGGC AAACTCAAGG CTGCGACCGA CGCCGAAGCG
AGCGAGCAGA AGCAGCCCAA CAAGCTGTTG CGCACGCAAG TCGGTGCCGA GGAAATCGCC
GAAGTGGTGA GCCGCGCGAC GGGCATCCCG GTATCGAAGA TGATGCAGGG CGAGCGCGAG
AAGCTGCTCA AGATGGAAGA CCGACTGCAC AACCGCGTGG TGGGCCAGGA CGAAGCCGTG
CGGCTGGTGT CCGATGCCAT CCGCCGTTCG CGTGCGGGCC TCGCGGACGA GAACAAGCCG
TATGGCTCGT TCCTGTTCCT GGGACCGACC GGTGTCGGCA AGACCGAACT GTGCAAGGCC
CTGGCCGAGT TCCTGTTCGA TTCGGAAGAG CACCTGATCC GCATCGACAT GAGCGAGTTC
ATGGAGAAGC ACAGCGTGAG CCGCCTGATC GGCGCGCCGC CGGGATATGT CGGATATGAA
GAGGGTGGTT ACCTGACCGA AGCCGTGCGC CGCAAGCCGT ACAGCGTGGT GCTGCTCGAC
GAAGTCGAGA AGGCACACCC GGACGTTTTC AACGTGCTGC TGCAGGTGCT GGACGATGGC
CGCCTGACCG ATGGCCAGGG ACGTACGGTG GACTTCAAGA ACACCGTGAT CGTGATGACG
TCCAACCTCG GTTCGCAGAT CATCCAGTCG ATGGTGGGCG AGCCGCAGGA AGCGGTGAAG
GGCGCGGTAT GGCAGGAGGT GCGCACGCAT TTCCGGCCCG AGTTCCTGAA CCGGATCGAC
GAAGTCGTGG TGTTCCACGC ACTCGACCAG AAGAACATCG AGTCGATCGC GCGCATCCAG
CTGCAACGCC TGCAGGGTCG CCTGGCCCGC ATGGACATGA CGCTGGAGGT CAGCGAACTG
GCGCTGGAGA AGATCGCGAG CGCGGGTTAC GACCCGGTGT TCGGGGCCCG TCCGCTCAAG
CGGGCGATCC AGCAGCAGAT CGAAAACCCG GTGGCACGTG CCATCCTGGA AGGAAAGTTT
GCTGCGAAGG ATGTGGTGCC GGTGGACTAT GCCGATGGGG CGTTTGTGAT CGGTGGAGTT
GCCCAGTAA
|
|---|
| Protein sequence | MRLDKLTTRF QEALADAQSL ALANDNQYIE PQHLLRALIA QNDGAAKALL QRAGVNVNGL
QTALDAAIKR LPQVQGTSEV QVGRDLVNLL NAAEKESIKR GDQFIASELF LLAVSEDKGE
AGRIARENGL NRKPLEAAIQ AVRGGDAVNS ADAETQREAL KKYTIDLTER ARMGKLDPVI
GRDDEIRRAI QILQRRTKNN PVLIGEPGVG KTAIVEGLAQ RIVNGEVPES LKNKRVLVLD
MAGLLAGAKY RGEFEERLKA VLNDVAKDEG QTIVFIDEIH TMVGAGKAEG AIDAGNMLKP
ALARGELHCI GATTLDEYRK YIEKDAALER RFQKVLVDEP SVEATIAILR GLQEKYELHH
GVEITDPAIV AAAELSHRYI TDRFLPDKAI DLIDEAAARI KMEIDSKPEA MDKLERRTIQ
LKIEREAVKK ETDEASLKRL DLIEQEITRL EKEYADLDEI WKAEKGAAQG TAALKEEIEK
VKLEIAKLQR EGKLDKVAEL QYGKLPGLEG KLKAATDAEA SEQKQPNKLL RTQVGAEEIA
EVVSRATGIP VSKMMQGERE KLLKMEDRLH NRVVGQDEAV RLVSDAIRRS RAGLADENKP
YGSFLFLGPT GVGKTELCKA LAEFLFDSEE HLIRIDMSEF MEKHSVSRLI GAPPGYVGYE
EGGYLTEAVR RKPYSVVLLD EVEKAHPDVF NVLLQVLDDG RLTDGQGRTV DFKNTVIVMT
SNLGSQIIQS MVGEPQEAVK GAVWQEVRTH FRPEFLNRID EVVVFHALDQ KNIESIARIQ
LQRLQGRLAR MDMTLEVSEL ALEKIASAGY DPVFGARPLK RAIQQQIENP VARAILEGKF
AAKDVVPVDY ADGAFVIGGV AQ
|
|---|
| |