| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1979 |
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| Symbol | |
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| ID | 3611625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 2165575 |
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| End bp | 2168418 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637691369 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_296187 |
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| Protein GI | 73541667 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0897948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCGA GATCTTCCCT GGCGTTGCTT ATCTTCGGTG CCATGCCCGG AGTCCCCGAG
GCCGAAGCGG CCGAATGTTC GCCATGGCAA GGCGGCAAGG CCGTTGCCAA TGCGTGCGAG
CTGACGCTTG CCGGTGGCAC CATCGATACC GGCCGGGGCG ATTACCAGGC TGCGGTGACT
GCGCAAGACG GCGGCATCGT GACGGCCACC GGCCCGCTCA AGCTGTTCAC CGCCGGCAAC
GACGCAACGG GCATCTTCGC GCAAAGCCAA GGCAAGATCA CGCTCACCGT GCCCGGCAAT
TCCGTGATGA CAAGCGGCAA GAATTCCTAC GGCGTGCAGA GCTTCGGCTC GCAATACATC
ACCGCGCAAG CCACGATCGT GACCTCGGGC GAGCAATCGC ACGCGGCGTT CGAAGACTTC
GGCGGCGCCA TCCGGCTGAC GGACTCTGAC CTCACGACCA GCGGCGCGCG CGCGGCAGGC
GCGGCGATTC AGGGCGGCGG CGTCATCGAC CTGGAAGGCA CCACCACCAT CACCACGCGC
GGCGATTCGG CGCCGGGCCT GTTTGCGACC GATGCGGGTT CACGCGGAAT TCTCGGCGTG
AACGGCGCTG GCAACTTCAC GATCCGCACC AACGGCGCCG ACGCCCCGGC CGCCATCGCT
CGCAACGGCG GCGTGCTGAA CCTGCGTGGC AACAGTGCCA TTACGACAGC GGGCCGCGGC
AGCCATGGCC TGTATGTGTA CGCCGATGGC TCCAGCCTGA CGGCGCAGAA CGCGCAGGTC
CGCACCGAAG GCCCATCCGC CCTTGGCGCG CTCGCGACGC AGCACGGCGC CATCACGCTG
GCCGATAGCA CCATCACCAC GACTGGCCCA GGCAGCCACG GATTGGCCGT CCATGAGGGC
GCCAGCATTG TCGCGCGCAA TGTGACAGTC AACACGTCGG GTCAGCAGGC CCATGGGGCC
GAGCTCGCCA ACGGCGCACG GCTCGACCTG TACAACGTGA CCCTACGCAG CACCGGCAGC
GGCGCTGGCC TCTACAGCCA TGCTGCCGAC GCCAATGCAC CTGTTACCGT GCTGATCGAC
GGCGGCCTTG TCGATACGGC GCAATCAGCC GCCCAGGTAG CGGGCAGCGA TATGGATCTG
ACCGTGCGGA ACGGGGCCAT CCTGCGCGCC GGCACAGGAC GCGTGGCCGA AGTCATGTCG
ATGAACGGCC AGGCGGCACG ACTCACCCTG GCAGCCGACC GCGCCACGCT GAACGGTGAC
ATCGTTGCCG ATGCCGCCGG CGGCAACATT GCAGATGTCA CGTTGACCAA CAGAACAGTG
CTGACAGGGG CCGTCACCGG CGCACGCACG CTTGGCGTAC AGCAAAGCCA GTGGACCGTC
ACTGCCGACA GCACCGTCAG CACGCTGACC AACAGCGGGG CCATCGTCTT CGGTGATGGC
TTTCACCTGC TCGCCACGCG TAGCTACACC GGCCAGTCCG GCAATCTGAC GCTCAATACC
CGACTGGGCA TCGACGAATC ACCGTCCGAT CGCCTGCAGG TCGCAGACAT GGCATCCGGC
ACCACGGCGC TGCGCATACG CAATGCCGGT GGCCCCGGCG CCACCACGAC CGGCAACGGC
ATACTCGTCA TCGACGCCCA CGCCAGTGAA CCGCATGCCT TTGCGCTGGC CGGCCCCGTG
GTCGCAGGCC CGTACGAGTA CACGCTGCAG CGCGGCAGCA CCGACGCGAG CGCGCCGCAG
AGCTGGTACC TGCGCTCGAC ACTCGACTGT CCGGGCGCGG GAGCGCCGTC CCCGCCCTGC
CCTGCGCCGA AGCCATCGCC CGCACCTCCT GGTCCTGTAC CGCCGATTCC CAACTACCGG
CCTGAAGTCT CGCTCTATAC CGCCATCGCA CCGCTGGCGC TTCAGTACGG CCGCTCGCTG
ATGGACACGC TGCATGAACG CATGGGCGAG CAGGCCGTGC TGCGCAACCG CAGCGACCTT
TCAGGCGAGC CGGTGCCCAG CGCTGGCTGG GGCCGCGTCA TCGGCATGCA GGGCAATCGC
GATGGCGGCC AGCGTGGCAT CTACGGCAAG ACACCGAGCT ACGACTATCG CTTCGCCGGC
ATGCAAATCG GCGCAGACCT GCTGCGCCAC ACGCATGACG ACGGACGCCG CGACCACGCC
GGCGTCTATG GCGCCATCGG CTACGCGGGC ATGGATGTCG ATCACTTCAC CGGCGTGCGT
GCCGGCACCA ACCGCTTCGA CGGCTACACG GTCGGCAGCT ACTGGACCCA CTACGGCCTG
CAGGACTGGT ACTTGGACGG CGTGATTCAG GGCACCTGGT ACAACGTGCG CGCAAGCTCG
AACCGCGGCC TGCCCGAACT GACCACCCAT GGCGTCGGGC TTGCCTCATC CATCGAAGCA
GGCTATCCGT TTGCCTTGGG CCAGGGCTGG GTGCTGGAAC CGCAATCGCA ACTGCTGTAC
CAGTGGGTGA AGCTCGACGA CTCGTCGGAT GCGGGCGCCA CCGTGCACTT CGACAACGTC
CGCTCGCTGG CGGGCCGTGT CGGCGCACGA ATCGCCAGAA CATGGCAAGA CGACGAAGCT
GTCCAGCCGC GCCAGTTCAC CGTGTGGGCA CGTGTATCGG CGTGGTATGA ATTTCTTGGC
GATCCGCGCA CGGCGTTTTC CACTGCATCG GGGTTCATCC CGTTCCAGGC AGATCTGTCG
GGCGGCTGGA GCGAACTCAA GGCCGGTTTC AGCGCAGAGT TCCGGCGCAA CCTGTTCGCC
TACGCCAGTG CCGGATACCA GCGCGGATTC GATGGCACGC GGCAGGCCTG GGACGGCAAG
CTTGGCGTGC GGTTCAACTG GTAA
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| Protein sequence | MLARSSLALL IFGAMPGVPE AEAAECSPWQ GGKAVANACE LTLAGGTIDT GRGDYQAAVT
AQDGGIVTAT GPLKLFTAGN DATGIFAQSQ GKITLTVPGN SVMTSGKNSY GVQSFGSQYI
TAQATIVTSG EQSHAAFEDF GGAIRLTDSD LTTSGARAAG AAIQGGGVID LEGTTTITTR
GDSAPGLFAT DAGSRGILGV NGAGNFTIRT NGADAPAAIA RNGGVLNLRG NSAITTAGRG
SHGLYVYADG SSLTAQNAQV RTEGPSALGA LATQHGAITL ADSTITTTGP GSHGLAVHEG
ASIVARNVTV NTSGQQAHGA ELANGARLDL YNVTLRSTGS GAGLYSHAAD ANAPVTVLID
GGLVDTAQSA AQVAGSDMDL TVRNGAILRA GTGRVAEVMS MNGQAARLTL AADRATLNGD
IVADAAGGNI ADVTLTNRTV LTGAVTGART LGVQQSQWTV TADSTVSTLT NSGAIVFGDG
FHLLATRSYT GQSGNLTLNT RLGIDESPSD RLQVADMASG TTALRIRNAG GPGATTTGNG
ILVIDAHASE PHAFALAGPV VAGPYEYTLQ RGSTDASAPQ SWYLRSTLDC PGAGAPSPPC
PAPKPSPAPP GPVPPIPNYR PEVSLYTAIA PLALQYGRSL MDTLHERMGE QAVLRNRSDL
SGEPVPSAGW GRVIGMQGNR DGGQRGIYGK TPSYDYRFAG MQIGADLLRH THDDGRRDHA
GVYGAIGYAG MDVDHFTGVR AGTNRFDGYT VGSYWTHYGL QDWYLDGVIQ GTWYNVRASS
NRGLPELTTH GVGLASSIEA GYPFALGQGW VLEPQSQLLY QWVKLDDSSD AGATVHFDNV
RSLAGRVGAR IARTWQDDEA VQPRQFTVWA RVSAWYEFLG DPRTAFSTAS GFIPFQADLS
GGWSELKAGF SAEFRRNLFA YASAGYQRGF DGTRQAWDGK LGVRFNW
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