| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1810 |
|---|
| Symbol | |
|---|
| ID | 3609910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 1978096 |
|---|
| End bp | 1980708 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637691200 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | YP_296019 |
|---|
| Protein GI | 161611260 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.38661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTG CACACCGCAA ACCACTGCCG GGCACCAAGC TGGATTTCTT TGACGCGCGC
GAAGCCGTCG AGGCAATCCA GCCGGGTGCC TATGACAAGC TGCCCTACAC GTCGCGCGTG
CTGGCCGAGA ATCTCGTGCG CCGCTGCGAC CCGGCCACGC TGACCGATTC GCTCAAGCAG
CTGATCGAGC GCAAGCGCGA ACTGGATTTC CCGTGGTTCC CCGCGCGCGT GGTATGCCAT
GACATCCTTG GCCAGACCGC GCTGGTGGAC CTGGCCGGCC TGCGCGACGC CATCGCCGAC
CAGGGCGGCG ACCCCGCCAA GGTCAACCCG GTGGTGCCGG TGCAACTGAT CGTCGACCAC
TCGCTGGCCG TCGAATGTGG CGGTTTCGAC CCGGATGCGT TCGCCAAGAA CCGCGCCATC
GAGGATCGCC GCAACGAGGA CCGCTTCGAC TTCATCAACT GGACCAAGAA GGCCTTCCAG
AACGTCGACG TGATCCCGCC GGGCAACGGC ATCATGCACC AGATCAACCT GGAGAAGATG
TCGCCCGTGA TCCACGCGGA CAAGGGCGTG GCCTACCCCG ACACCTGCGT GGGCACCGAC
AGCCACACGC CGCACGTCGA CGCGCTGGGC GTGATCGCCA TCGGCGTGGG CGGCCTGGAA
GCCGAGAACG TCATGCTGGG CCGCGCCTCG TGGATGCGCC TGCCTGACAT CGTCGGCGTC
GAGCTGACCG GCAAGCGCCA GCCTGGCATC ACCGCCACCG ACATCGTGCT GGCCCTGACC
GAGTTCCTGC GCAAGGAAAA AGTCGTCGGC GCATACCTGG AATTCCGCGG CGAAGGTGCC
TCGAGCCTGA CGCTCGGGGA CCGCGCCACG ATCTCGAACA TGGCACCGGA GTACGGCGCT
ACGGCTGCGA TGTTCTTCAT CGACAACCAG ACGCTGGACT ACCTGCGCCT GACCGGCCGC
GAAGACGAGC AGGTCAAGCT GGTCGAGACG TATGCGAAGA CCGCCGGCCT GTGGGCCGAC
ACGCTGAACA ACGCCGAGTA CGAGCGCGTG CTGAAGTTCG ACCTGTCGAG CGTCGTGCGC
AACATGGCCG GCCCGTCGAA CCCTCACAAG CGCCTGCCGA CTTCGGCACT GGCCGAGCGC
GGTATCGCCG TGGACCTCGA CAAGGCCAAG GCGCAGGAAG CCGAAGGTCT GATGCCCGAT
GGCGCCGTGA TCATCGCCGC CATCACCAGC TGCACCAACA CCAGCAACCC GCGCAACGTG
ATTGCCGCCG CGCTGCTCGC GCGCAATGCC AATGCGCGTG GCCTGACCCG CAAGCCGTGG
GTCAAGTCAT CGCTCGCGCC GGGATCGAAG GCGGTCGAGC TGTACCTGGA AGAGTCGAAG
CTGCTGCCGG ACCTGGAAGC ACTGGGCTTT GGCATCGTCG CGTTCGCCTG CACGACCTGC
AACGGCATGT CGGGCGCGCT GGATCCGAAG ATCCAGCAGG AAATCATCGA CCGCGACCTG
TACGCGACGG CTGTGCTGTC GGGCAACCGC AATTTCGACG GCCGCATTCA CCCGTACGCC
AAGCAAGCCT TCCTGGCTTC GCCGCCGCTG GTGGTGGCCT ACGCCATCGC CGGCACGATG
CGCTTCGACA TCGAGCGCGA CGTGCTGGGC ACCGACAAGG AAGGCAAGCC GGTGTACCTG
AAGGACATCT GGCCGACCGA CGAAGAGATC GACGCGATCG TCGCCAAGTC GGTGAAGCCC
GAGCAGTTCC GCAAGGTCTA CGAGCCGATG TTCGCGATCA CCGCGCAAAG CGGCGAGCCC
ATCAGCCCGC TGTACGACTG GCGCGCGCAG AGCACGTACA TCCGCCGCCC GCCGTACTGG
GAAGGCGCCC TGGCCGGCGA ACGCACGCTG AAGGGCCTGC GTCCGCTGGC AGTGCTCGGC
GACAACATCA CCACCGACCA CCTGTCGCCG TCGAACGCGA TCCTCGCCAA CAGCGCCGCG
GGTGAGTACC TGGCTAAGAT GGGCCTGCCG GAGGAGGACT TCAACTCTTA CGCAACCCAC
CGCGGCGACC ACCTGACCGC GCAACGCGCA ACGTTCGCCA ACCCGACGCT GATCAACGAA
ATGGCCGTGG TCGACGGCCA GGTCAAGAAG GGTTCGCTGG CACGCGTCGA GCCCGAAGGC
AAGGTCGTGC GCATGTGGGA AGCCATCGAG ACCTACATGG ACCGCAAGCA GCCGCTGATC
ATCGTGGCGG GTGCCGACTA CGGCCAGGGC TCGTCGCGTG ACTGGGCGGC CAAGGGCGTG
CGTCTGGCGG GCGTGGAAGT GATCGTGGCC GAAGGCTTCG AGCGCATCCA CCGCACCAAC
CTGATCGGCA TGGGCGTACT GCCGCTCGAG TTCAAGCCGG GCGTGAACCG CCTGACGCTG
GGCCTCGACG GCACCGAAAC CTACGACGTG ACGGGCGAGC GCCAGCCGCG TGCGGACCTC
ACGCTGGTGA TCCACCGCCG CAATGGCGAG CGCATCGAAG TGCCCGTGAC GTGCCGCCTG
GACAGCGACG AGGAAGTGTC GATCTACGAA GCCGGCGGCG TGCTGCAGCG CTTCGCGCAG
GACTTCCTTG AATCCGCGAA AGCGGCTGCT TAA
|
|---|
| Protein sequence | MNTAHRKPLP GTKLDFFDAR EAVEAIQPGA YDKLPYTSRV LAENLVRRCD PATLTDSLKQ
LIERKRELDF PWFPARVVCH DILGQTALVD LAGLRDAIAD QGGDPAKVNP VVPVQLIVDH
SLAVECGGFD PDAFAKNRAI EDRRNEDRFD FINWTKKAFQ NVDVIPPGNG IMHQINLEKM
SPVIHADKGV AYPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPDIVGV
ELTGKRQPGI TATDIVLALT EFLRKEKVVG AYLEFRGEGA SSLTLGDRAT ISNMAPEYGA
TAAMFFIDNQ TLDYLRLTGR EDEQVKLVET YAKTAGLWAD TLNNAEYERV LKFDLSSVVR
NMAGPSNPHK RLPTSALAER GIAVDLDKAK AQEAEGLMPD GAVIIAAITS CTNTSNPRNV
IAAALLARNA NARGLTRKPW VKSSLAPGSK AVELYLEESK LLPDLEALGF GIVAFACTTC
NGMSGALDPK IQQEIIDRDL YATAVLSGNR NFDGRIHPYA KQAFLASPPL VVAYAIAGTM
RFDIERDVLG TDKEGKPVYL KDIWPTDEEI DAIVAKSVKP EQFRKVYEPM FAITAQSGEP
ISPLYDWRAQ STYIRRPPYW EGALAGERTL KGLRPLAVLG DNITTDHLSP SNAILANSAA
GEYLAKMGLP EEDFNSYATH RGDHLTAQRA TFANPTLINE MAVVDGQVKK GSLARVEPEG
KVVRMWEAIE TYMDRKQPLI IVAGADYGQG SSRDWAAKGV RLAGVEVIVA EGFERIHRTN
LIGMGVLPLE FKPGVNRLTL GLDGTETYDV TGERQPRADL TLVIHRRNGE RIEVPVTCRL
DSDEEVSIYE AGGVLQRFAQ DFLESAKAAA
|
|---|
| |