Gene Reut_A1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1784 
Symbol 
ID3610137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1946263 
End bp1948005 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content64% 
IMG OID637691174 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_295993 
Protein GI73541473 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4993] Glucose dehydrogenase 
TIGRFAM ID[TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGACGT TACGACTAAT GATGGCCGTC GCGACCGCCG TGGCCAGTCT GGCCACTCAG 
GCGGCAGTGA CCGATGCCAT GATCGAGAAC GATGCGAAGA GCCCCGGCGA CGTGTTGTCA
TGGGGCATGG GACCGCAAGG GCAGCGCTAT TCCGGCCTCA CGCGCATCAA TACCAAAAAC
GTCGGCAACC TGGTGCCGGC GTGGTCGTTC TCGTTCGGCG GCGAGAAGCA GCGCGGGCAG
GAAGCGCAGC CGCTGATCCA CGACGGCAAG ATGTTCGTCA CGGCGTCGTA TTCGCGCATC
TACGCGCTCG ACCTGAAGAC CGGCAGCAAA TTGTGGAAGT ACGAACACCG CCTGCCGGAA
GGCATCATGC CGTGCTGCGA CGTGGTCAAC CGCGGCGCGG CGCTCTACGA CAACCTGGTG
ATCTTCGGCA CGCTCGATGC GCAACTGGTG GCACTGGACC AGAAGACCGG CAAGGTCGTG
TGGAAGGAGA AGCTGGAGGA CTATGCAGCA GGCTATTCCT ATACGGCGGC GCCGCTGATC
GTCAAGGGCA TGGTGCTCAC CGGCATCTCG GGCGGCGAAT TCGGTGTGGT CGGCCGCGTC
GAGGCCCGCG ACGCCAAGAC CGGGCAACTG GTGTGGTCGC GCCCCGTGGT GGAAGGCCAT
ATGGGCTACA AGTACGACAA GGACGGCAAC AAGACCGAGA ACGGCGTGAC CGGCACGGAG
AACGCAAGTT GGCCCGGCGA AACGTGGAAG ACCGGCGGTG CCGCCACGTG GCTCGGCGGC
ACCTATGATC CGGCCACCGG TCTCGCTTAC TTCGGGACCG GCAACCCCGG CCCGTGGAAT
AGCCATATCC GCAAGGGGGA CAACCTCTAT TCGGCGTCGA CGGTGGCCAT CGATCCGGCC
ACCGGCAAGA TCGTCTGGCA CTACCAGAAC ACCCCGAACG ACGGCTGGGA TTTTGACGGC
GTCAATGAGT TCGTGACCTT CGACCTGGAC GGCAAGCGCA TGGGCGGCAA GGCCGACCGC
AACGGCTTCT TCTATGTCAA CGATGCGACC AACGGCAAAC TGGTCAATGC CTTCCCGTTC
GTGAAGAAGA TCACGTGGGC CACTGGCATC GACCTGAAGA CCGGTCGGCC CACCTTCAAC
GACGAGGGTC GCCCGGGCGA TCCGGCCAGC GGCGCCGACC CGAAGAAGGG CAAGTCCGTG
TTCGCCGCGC CCGGCTTCCT GGGTGGCAAG AACCAGCAGC CAATGGCCTA CAGCCCGCAG
ACGGGCTTGT TCTACGTGCC GGCCAACGAA TGGGGCATGG ATATCTGGAA TGAGCCCGTC
AGCTACAAGA AGGGCGCCGC CTTCCTGGGT GCCGGATTCA CCATCCATCC ACTGAACGAG
GACTACATCG GTTCGCTGCG CGCCATCAAC CCCAAGACCG GCAAGATCGT CTGGGAGGTC
AAGAACAACG CGCCGCTGTG GGGCGGTGTG ATGACCACCG CCGGCGGGCT GGTGTTCTGG
GGCACGCCGG AAGGCTACCT CAAGGCCGCC GACGCCCGGA CCGGCAAGGA GCTGTGGAAG
TTCCAGACCG GCAGTGGCGT GGTCGCGCCG CCGGTCACCT GGGAAGAGAA CGGCGAGCAG
TATGTCGCCG TGGTGTCGGG CTGGGGCGGT GCGGTGCCGC TGTGGGGCGG GGAAGTCGCC
AAGCGCGTGA ATTTCCTGGA GCAGGGCGGT TCGGTGTGGG TGTTCAAGCT GCACAAGGGC
TGA
 
Protein sequence
MRTLRLMMAV ATAVASLATQ AAVTDAMIEN DAKSPGDVLS WGMGPQGQRY SGLTRINTKN 
VGNLVPAWSF SFGGEKQRGQ EAQPLIHDGK MFVTASYSRI YALDLKTGSK LWKYEHRLPE
GIMPCCDVVN RGAALYDNLV IFGTLDAQLV ALDQKTGKVV WKEKLEDYAA GYSYTAAPLI
VKGMVLTGIS GGEFGVVGRV EARDAKTGQL VWSRPVVEGH MGYKYDKDGN KTENGVTGTE
NASWPGETWK TGGAATWLGG TYDPATGLAY FGTGNPGPWN SHIRKGDNLY SASTVAIDPA
TGKIVWHYQN TPNDGWDFDG VNEFVTFDLD GKRMGGKADR NGFFYVNDAT NGKLVNAFPF
VKKITWATGI DLKTGRPTFN DEGRPGDPAS GADPKKGKSV FAAPGFLGGK NQQPMAYSPQ
TGLFYVPANE WGMDIWNEPV SYKKGAAFLG AGFTIHPLNE DYIGSLRAIN PKTGKIVWEV
KNNAPLWGGV MTTAGGLVFW GTPEGYLKAA DARTGKELWK FQTGSGVVAP PVTWEENGEQ
YVAVVSGWGG AVPLWGGEVA KRVNFLEQGG SVWVFKLHKG