| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1360 |
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| Symbol | |
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| ID | 3611559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 1462369 |
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| End bp | 1465821 |
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| Gene Length | 3453 bp |
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| Protein Length | 1150 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637690749 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_295574 |
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| Protein GI | 73541054 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGACG CCGCACCCGC CTTCCCGTTC GCCAACCTGC CCCTGGTCAA GCCCGGGCTG
CGCCATAGCA TGGCGGGCCT GCCCGGCTCC GCCGACGCAC TCGCCATTGC CGCCTACGCG
CGCCAGCACA GGGAGCGCGT GCCGATGCTG GCCGTGGTCT GCGCCAACGC CGTCGACGCC
CAGCGGCTCG CCGATGAAAT CCCGTGGTTC GCGCCCGAAA CGCGCGTACG CCTGCTGCCG
GACTGGGAAA CGCTGCCCTA CGATAGCTTT TCTCCCCACC AGGACCTGGT GTCGGAACGT
CTCGCGACGC TGCACGACAT CCAGACCGGC CAGTGCGACG TGATGCTCGT GCCGGCCTCT
ACAGCGCTCT ACCGGCTAGC GCCGCCGTCA TTCCTGGCCG CCTATACGTT CTTCTTCAAG
CAGGGGGAAC GGCTGGACGA AGCCGCGCTC AAGGCGCAGT TCACGCTGGC AGGCTACGAG
CACGTCAGCG CCGTGATGCG TCCGGGCGAA TACAGCGTGC GCGGCGGCCT GATCGACCTG
TACCCGATGG GTTCGGCGCT GCCGTACCGC ATCGATCTCT TCGGCGACGA GATCGAAACC
ATCCGCGCCT TTGATCCCGA CACGCAACGC AGCCTGTACC CGGTCAAGGA AGTCCGGCTG
CTGCCGGGCC GCGAGTTTCC GCTTGATGAA GCCGCCCGCA CGGCATTCCG CGGCCGCTGG
CGCGAAGTCT TCGAAGGCGA CCCTAGCAAG TCGCCCATCT ACAAGGACAT CGGCAACGGT
GTTCCTTCGG CCGGGATCGA GTACTACCTG CCGTTGTTCT TCGAGTCCAG CGCGACGCTG
TTCGACTTTC TGCCGGCCGA TACCCAGCTT GCCTTCGTCG GCAAGGTGGA CGAAGCCATC
CGCCGCTTCT GGACGGATAC CACGCAGCGC TACGACTTCA TGCGGCATGA CCGCGAGCGC
CCGCTGCTGC CGCCGCCGCA ACTGTTCCTG TCCGAGGAGC AGTTCTTCAT TGCGGCCAAG
CCGCTCGCGC GGCTGGTACT GCAAAGCGAA CCGGCGGCGG ACGGCCAACC CGCGTTTGCG
GCGAGCGTTC CCGATGTCTC GGTGAACCGT CGCGCCGAAG ATCCGCTCGT GAACCTGGAA
TCCCTGCTGC TGGACAAGGC CACGCGCGTA CTGATGTGCG CCGATACCGC CGGCCGCCGC
GAGACCCTGC TGCAGCTGTT CGCCGAAAGC GGCCTGCGCC CGCAACCCGT GGACGACTTT
GCCGCGTTCC TGGCTGGCGA GTCGCACTTC AGCATCGCCG TGGCGCCCCT GCACAGCGGC
TTCATGCTGC CGTCCGCGAA ATTCGCCTTC GTCACGGAAG CCGAACTCTA CGCCGGCACC
GCGCGCCGCG CGGGCCGCCG CAAACAGGAA CAGGCCACCG CCGTCGATTC GATGGTGCGC
GACCTGGCCG AGCTGAAGAT CGGCGACCCG GTGGTGCACA GCGACCACGG CATTGGCCGC
TACCACGGCC TGGTGTCGCT CGACATGGGC CAGGGGGACG AGGAATTCCT GCATCTCGAA
TACGACAAGG GCAGCAAGCT GTACGTGCCG GTGCATCAGC TCCACGTGAT CTCGCGCTAT
TCGGGCGCTG ATCCGGACAC CGCACCGCTG CATCACCTCG GCTCGGGCCA GTGGGACAAA
GCCAAGCGCA GGGCTGCGCA GCAGATCCGC GATACGGCGG CCGAACTGCT GAACCTGTAC
GCACGGCGCG CCGCGCGCGA AGGCTTTGCG TTCCCACTCT CCCCCAAGGA CTACGAGACC
TTCGCCGAAA GCTTCGGCTT CGAGGAAACG CCCGATCAGG CCGCGGCGAT CGCTGCCGTC
ATCGCCGACA TGACCTCGGG CAAGCCCATG GACCGGCTGG TGTGCGGCGA CGTCGGCTTC
GGCAAGACCG AAGTCGCCTT GCGCGCGGCG TTCGTCGCCG TGCTCGGCGG CAAGCAGGTT
GCCATGCTGG CGCCGACCAC GCTACTCGCC GAGCAGCATT TCCAGACGCT GTCGGACCGC
TTCGCCGAAT GGCCGGTGCG CATCGTCGAG CTGTCGCGCT TCAAGACGAA GAAGGAAATC
GACGCGGCGG TGAAGCAGAT CAACGAGGGC ACGGTCGATA TCGTGATCGG CACGCACAAG
CTGCTCTCGG ATGAAGTGAA GTTCCAGCGC CTCGGCCTCG TCATCATCGA CGAGGAGCAC
CGCTTTGGCG TACGCCAGAA GGAAGCGCTG AAAACGCTGC GCGCCGAGGT CGACGTGCTG
ACGCTCACGG CCACGCCGAT TCCGCGAACA CTTGGCATGG CGCTCGAAGG CCTGCGCGAT
TTTTCCGTGA TTGCCACAGC GCCGCAAAAA CGCCTGGCCA TCAAGACCTT CGTGCGGCGC
GAGGAAGACG GCGTGATCCG CGAAGCCATC CTGCGCGAGC TCAAGCGCGG CGGACAGGTG
TATTTCCTGC ACAACGAAGT CGAGACCATC GAGAATAAGC GCGCGAAGCT GGCCGAACTG
GTGCCTGAAG CGCGCATTGC CGTGGCCCAC GGCCAGATGC ACGAACGCGA GCTGGAACGC
GTGATGCGCG ACTTCGTCTC GCGGCGCGAC AACATCCTGC TGTGCACGAC GATCATCGAG
ACCGGCATCG ACGTGCCAAC CGCCAACACC ATCCTGATCC ATCGCGCCGA CAAATTCGGT
CTCGCGCAGC TTCACCAGTT GCGTGGCCGC GTCGGCCGCT CGCACCATCA GGCCTATGCG
TACTTGCTCG TGCATGATGT GGATGGCCTT ACCAAGCAGG CGGGGCGCCG GCTCGAGGCC
ATCCAGCAGA TGGAAGAACT GGGTTCGGGC TTCTACCTGG CGATGCACGA CCTGGAAATC
CGCGGCGCCG GCGAGGTGCT TGGCGACAAG CAGTCCGGCG AAATCCACGA GATCGGCTTC
CAGCTCTACA CCGACATGCT GAACGCAGCG GTCAAGGCGC TCAAGGCCGG CAAGGAGCCG
GACCTGATGG CGCCGCTCGC GGCGACCACC GAGATCAATC TCGGCACGCC CGCGCTGCTG
CCCAACGACT ATTGCGCCGA CGTGCACGAA CGCCTGTCGC TGTACAAGCG GCTCGCGAAC
TGTGAAACCC CGGAGCGCGT CGACGACATC CAGGAAGAGC TGATCGACCG CTTCGGCCGC
ATGCCGGACC AGGCGCAGGC GCTGGTGGAA ACCCATCGGC TGCGCATCGC CGCGGCACCG
CTCGGCGTGC GCAAAATCGA TGCGGGCGAG GCGTCGATCA GCGTACAGTT CGTGCCGAAT
CCGCCGATCG ATGCGCTGCG GATCATCGAG CTCGTGCAGA AGAACCGGCA TATCAAGCTC
GCGGGGCAGG ACAAGCTGCG CATTGAAGCC AAGATGCCCG ACGTGGCCGT GCGCGCGCAG
ACCATCAAGC AGACGCTGCG CCAGCTGGCA TAG
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| Protein sequence | MPDAAPAFPF ANLPLVKPGL RHSMAGLPGS ADALAIAAYA RQHRERVPML AVVCANAVDA
QRLADEIPWF APETRVRLLP DWETLPYDSF SPHQDLVSER LATLHDIQTG QCDVMLVPAS
TALYRLAPPS FLAAYTFFFK QGERLDEAAL KAQFTLAGYE HVSAVMRPGE YSVRGGLIDL
YPMGSALPYR IDLFGDEIET IRAFDPDTQR SLYPVKEVRL LPGREFPLDE AARTAFRGRW
REVFEGDPSK SPIYKDIGNG VPSAGIEYYL PLFFESSATL FDFLPADTQL AFVGKVDEAI
RRFWTDTTQR YDFMRHDRER PLLPPPQLFL SEEQFFIAAK PLARLVLQSE PAADGQPAFA
ASVPDVSVNR RAEDPLVNLE SLLLDKATRV LMCADTAGRR ETLLQLFAES GLRPQPVDDF
AAFLAGESHF SIAVAPLHSG FMLPSAKFAF VTEAELYAGT ARRAGRRKQE QATAVDSMVR
DLAELKIGDP VVHSDHGIGR YHGLVSLDMG QGDEEFLHLE YDKGSKLYVP VHQLHVISRY
SGADPDTAPL HHLGSGQWDK AKRRAAQQIR DTAAELLNLY ARRAAREGFA FPLSPKDYET
FAESFGFEET PDQAAAIAAV IADMTSGKPM DRLVCGDVGF GKTEVALRAA FVAVLGGKQV
AMLAPTTLLA EQHFQTLSDR FAEWPVRIVE LSRFKTKKEI DAAVKQINEG TVDIVIGTHK
LLSDEVKFQR LGLVIIDEEH RFGVRQKEAL KTLRAEVDVL TLTATPIPRT LGMALEGLRD
FSVIATAPQK RLAIKTFVRR EEDGVIREAI LRELKRGGQV YFLHNEVETI ENKRAKLAEL
VPEARIAVAH GQMHERELER VMRDFVSRRD NILLCTTIIE TGIDVPTANT ILIHRADKFG
LAQLHQLRGR VGRSHHQAYA YLLVHDVDGL TKQAGRRLEA IQQMEELGSG FYLAMHDLEI
RGAGEVLGDK QSGEIHEIGF QLYTDMLNAA VKALKAGKEP DLMAPLAATT EINLGTPALL
PNDYCADVHE RLSLYKRLAN CETPERVDDI QEELIDRFGR MPDQAQALVE THRLRIAAAP
LGVRKIDAGE ASISVQFVPN PPIDALRIIE LVQKNRHIKL AGQDKLRIEA KMPDVAVRAQ
TIKQTLRQLA
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