| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0539 |
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| Symbol | |
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| ID | 3611259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 585116 |
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| End bp | 586414 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637689930 |
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| Product | GGDEF |
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| Protein accession | YP_294765 |
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| Protein GI | 73540245 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAGG GCGGTCCACA CCTTGATCGA AGTCGCCTTA CATGGCAAGG CAGCCGCAGA
ACTGCCTGCA TTACCTTGAA TCTCGATTCC ATCCCTGAAT TCGCGATCGA TCCGCTGCGT
CTGGAGTTCC GAAGCGCGGA AACGGAACTG GCGTTCCAGC ACCACCATCT GGATCGCAGT
CGGGCGAGCC TGCGCCTGAC ACTGATTTTC TGCTCCGTCT TCTATCTGGC CTTTGCCATG
ACGGATGTGG CGGTGCTGGG CTATGGACGC GAGGCGCTGA TCCTGTTCGC CGCGCGCATG
CTGGTCGCGA TCACCGCAAC CATGGGCTTG TTCCTGATCC GCAACCAGCA GGAGCCCATT
GCGGGCCTGT GGTTCGTTGC CAGTGCCGCC GAGGTGGTGG GCATGGCCAC CTTCATGCTT
ATCGTCTGGT ACCGCCCCAG TGAAATTCCA TGGCATGGGA TGTCGCTGTG CATCATGCTG
ATCGTCGTCT ACATCTTCAT CCCTAACCGG CTGATCATCG CGAAGGGCAT CGCGATTGCC
TCGACGGCGG CGTTCGTTCT CGTCGCGTTG GAGAAAGGAA CCGGAACCGG CCCGCCCGCC
GGTACGCTGA CCATGTCGAT GCTATTGCTG CTTGCCAACA GCTTCGGGCT CGTAGCAGCG
CGTCGTTACC ATCGCCTGTG GCGAGACGAA TATCGCGTCC TCATGGACCT GAAGCAGGTG
TCCCTGAGAG ACCATCTGAC CGATTGCTAC AACCGACGCC ATCTGCATGA GACGCTGCTC
CCCACGGAAA TCGCGAGTGC GCGCCGGTAT CAGCACTGGC TGACCATGGT GGTCTGTGAC
ATTGACCACT TCAAGTCGAT CAACGACACG CATGGCCACC AGTCCGGTGA CGCCGTGCTG
CAGCACATCG CGGCCGTTCT CCGGGCCACC ACCCGCAGGC ACGTGGACAG CGTGGTCCGC
TATGGCGGCG AAGAATTCCT GCTGCTCCTG CCGCAAACGG GCCCGGACGG TGCCTCGTAT
GTGGCGGAGC GGCTCAGGAC TTCGATCGCG GGCAGTCCGA CGATCGATGG CGCTGGCCGA
AGCATCGAAG CGACGGCCAG CTTTGGAGTG CTGGCGGTCG ATTTCTCGTC CGTTGGAAGT
GATGTCACCG AAACGTCGTT GATCGCAGCC GCCGATGCGT TGCTTTACGA AGCCAAGGCA
TCCGGCCGGA ACAGCATCCG CTTCCGGGAA TGGCCCGGCA AATCGCGGGA ACAGGACGTC
GATGTTCTTG TGCTGGCTGC CTCTGATGCG CCGGGATGA
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| Protein sequence | MFEGGPHLDR SRLTWQGSRR TACITLNLDS IPEFAIDPLR LEFRSAETEL AFQHHHLDRS
RASLRLTLIF CSVFYLAFAM TDVAVLGYGR EALILFAARM LVAITATMGL FLIRNQQEPI
AGLWFVASAA EVVGMATFML IVWYRPSEIP WHGMSLCIML IVVYIFIPNR LIIAKGIAIA
STAAFVLVAL EKGTGTGPPA GTLTMSMLLL LANSFGLVAA RRYHRLWRDE YRVLMDLKQV
SLRDHLTDCY NRRHLHETLL PTEIASARRY QHWLTMVVCD IDHFKSINDT HGHQSGDAVL
QHIAAVLRAT TRRHVDSVVR YGGEEFLLLL PQTGPDGASY VAERLRTSIA GSPTIDGAGR
SIEATASFGV LAVDFSSVGS DVTETSLIAA ADALLYEAKA SGRNSIRFRE WPGKSREQDV
DVLVLAASDA PG
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