| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0061 |
|---|
| Symbol | |
|---|
| ID | 3611393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 75471 |
|---|
| End bp | 76562 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637689449 |
|---|
| Product | porin |
|---|
| Protein accession | YP_294287 |
|---|
| Protein GI | 73539767 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0431794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT CATCGGCCAT CGTCCTCGCC GCCGGCAGCC TGCTGGCAGG TTCCGCTTTT
GCACAGACTT CCGTCACGCT GTACGGTATC GCTGATGTCA GCGTTCGCTA CACCACCCAT
GCCGACGCAT CGGGTCACGG CAAGACCGAA CTGACCGATG GCGCTGTGAC GCAAAGCCGC
TGGGGCCTCA AGGGCGCTGA AGCCCTGGGC AACAACCTGA AGGCGATCTT CCAGCTCGAA
AACGGCTACA GCCTCGACAC CGGCAAGCTG AACTCGGCCA ACACGCTGTT CAATCGTCAG
GCCTACGTTG GCCTGAGCGG TGACTTCGGC GCTGTCAAGC TGGGCCGCCA GTACACCGAA
GGCTTTAATT TCTTCGGCGA CTACGATCCG CTGACCATCG GTAACTACAC CGCCAACGCC
TGGCCGTTCT TCCTGACCCA GTTCCGCGCG AACAACGTCA TGAGCTACGG CGGCAAGTTC
GGCGGCCTGG ACGTCGGCGC CAGCTACGGC TTCGGCGAAA CCGCCGGCAG CATGACCTCC
AACCAGTACT GGGGTGCCCG TGCCGCTTAC TCGTATGGCC CGTTCGGCAT CGGCGGCGTG
TACCAGGAAA TCCGTAACCA GGCTGGCGAG CGTCAGCAAA TGTTCGGTGC TGCCGGTAAG
TACAGCATCG GCCCGGCCAA GATCTTCCTG GGCTACCTCG GCGGCAAGGA CCGCACTGGC
GTGATCGACA ACGGTTTCAT GAACCAGTCG GCAGCCTCGA CGGGCGCAGG CGCTCAGACC
GCCATCACTG CTGGCGCCCT GAACAACCCG CGTAAGGACC ACCTGGGTTA TGTCGGCACG
ACCTACCAGG CCACTCCGGC CCTGGCAGTG ACCGGTGCGT TCTACTACGA CTACATCGAG
AACAAGAACG GTATCGCCGG CAATGGCGGC CACCGTTACG CCGGCGTCCT GCTGGCCGAG
TACTCGCTGT CGAAGCGTAC CCAAGTGTAC GGCACTGTCG ACTACAACCA CGTCTCGGGC
GGCGCGACGA CCGAACTGCC GGGCGCCAAC AACCAGCTGG GCGTGGCCGC TGGTATCCGC
CACATTTTCT GA
|
|---|
| Protein sequence | MKKSSAIVLA AGSLLAGSAF AQTSVTLYGI ADVSVRYTTH ADASGHGKTE LTDGAVTQSR
WGLKGAEALG NNLKAIFQLE NGYSLDTGKL NSANTLFNRQ AYVGLSGDFG AVKLGRQYTE
GFNFFGDYDP LTIGNYTANA WPFFLTQFRA NNVMSYGGKF GGLDVGASYG FGETAGSMTS
NQYWGARAAY SYGPFGIGGV YQEIRNQAGE RQQMFGAAGK YSIGPAKIFL GYLGGKDRTG
VIDNGFMNQS AASTGAGAQT AITAGALNNP RKDHLGYVGT TYQATPALAV TGAFYYDYIE
NKNGIAGNGG HRYAGVLLAE YSLSKRTQVY GTVDYNHVSG GATTELPGAN NQLGVAAGIR
HIF
|
|---|
| |