| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4450 |
|---|
| Symbol | |
|---|
| ID | 5541963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 5718373 |
|---|
| End bp | 5719275 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640896548 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001434484 |
|---|
| Protein GI | 156744355 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.519961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000344638 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTCA TCCCGCCAGA CGCTGCCGTT GCGGCAGTGC ATACGACGCC AGCGACTGTT
GCCGACAGTT ATCGGCGGTT ACTGACGCTG GTCGGAATCG CGGCGACACC ACGCCGCGCC
ATTCTGATCC CACGATACGC GCGATCTCTG CCCTTCCCCG GCGCCGGCGC AACCCCCTGG
CAACTGGAAA CGATGACGCG CCTCTTCCTT CGTGCAGGGG TCACCTCGAT CACGGCAGTT
CTGCCGGCCC GTCACTCCGA CATGCACGGG TACACCGCAA TTGCTGCTGC GCTTGGCATC
GATGCGCTAC GCAGTGCGCC GCAGATCGAC CATGAGACGC TGATTGTCGT GCTGATCCCG
TGCCGGATTG ATCGCCACAA CGGACTGTTC GGCGCGACCC CCGGTGTGGC GGCGCTCTTC
CATTCAGCCG CAGCAATACG CAATACGCCA CATACCCTCC CTGCCCTGGC GCAGGTGCGA
CGCCGCGGAG CGCAGCTGCT GGCAGTGGCG GACGCAACGA CAATCAGCGA TGGACGCGAT
GCCAAAACGG AGTACGCCGA GGTGCGCAGC GTGCTCCTGG CGTCACGCGA CCCTGCGGCG
CTCGACGCAA CGATTGCTGC ACAGTTCGGT CTCGATCCGC TCCAGGATGT TGCCTGGCTG
CACGAGGCGC ATCGGCAGGG TTGGGGAACG GCGGACCTGC ATGCGATGGC GATCTGCGGC
GATGTCGAGG CGCTCAATGA TCGGTGGGGG CTTGCGCCGC CGTCGCCCCG TCGGGCAATC
GGTTGCTGCC GACGCTGGAC AACGGCAGAC GCAACGACTC TGGTGAGCTG GCTGCGCCAT
ACCGGTTGGG GGCGGCTGTT CCGCAACTAC CAGACGCGCT ATGCTCTCCA CAGCAGGAGA
TAG
|
|---|
| Protein sequence | MMLIPPDAAV AAVHTTPATV ADSYRRLLTL VGIAATPRRA ILIPRYARSL PFPGAGATPW
QLETMTRLFL RAGVTSITAV LPARHSDMHG YTAIAAALGI DALRSAPQID HETLIVVLIP
CRIDRHNGLF GATPGVAALF HSAAAIRNTP HTLPALAQVR RRGAQLLAVA DATTISDGRD
AKTEYAEVRS VLLASRDPAA LDATIAAQFG LDPLQDVAWL HEAHRQGWGT ADLHAMAICG
DVEALNDRWG LAPPSPRRAI GCCRRWTTAD ATTLVSWLRH TGWGRLFRNY QTRYALHSRR
|
|---|
| |