| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4448 |
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| Symbol | |
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| ID | 5541961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5716197 |
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| End bp | 5717003 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640896546 |
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| Product | dihydroorotate dehydrogenase |
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| Protein accession | YP_001434482 |
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| Protein GI | 156744353 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00539475 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGTCAG TCGATCTTGC GCCGAACAAT CCATATGGAT TACCGCTGCG GGCGCCGGTG
ATGACGGCTG CCGGTTGCCT GGGGTTTGGC GTTGAGTATG AACGCATCAT TCCGCTCAAA
CATTTGGGCG CCATCGTCAC CGGCAGCATC TCGTTGCACG GCAGGCGCGC TCTGCCGCCG
TTGCGACTGG TCGAAACGCC GGGTGGGGTG CTGAGCGTGG GCGCATGGCG CGATCCGGGG
TTGACACGGG TATTGCGCGA ATACGCTCCT GCATGGGCAG CCTGGGAGAC GCCGGTGATT
CTAAGCGTCG CGACGGATCA TCGCAAGGTC GCGGCAGCGC TCGAAGGCGT CGAGGGAATT
GCGGGCATAG AACTGACCGT TGGCGACGAT TGGAGTGCGG CGGTGAGAGT CGTCGCAGCG
GTGCGCGCGG TGACATTGCT GCCGCTGCTG GTCAAACTGC CATTGCACGC GCGCTTGATC
GCTACAGCGC GCTCGGTCGT CGATGTCGGC GCCGACGCCG TGACCATTGC CGCACCGCCG
CGTGCCAGCG CAGCAGACCC GCACACCGGC GAACTGGTGC ATGGTTGGCT CTCCGGTCCT
GCCATTCGTC CGCTGGTGCT GGAGGCAGTC GCTGAAGTGT GTGCCACGCT GCCCGCGCCG
GTCGTGGCGT GCGGTGGGAT CGTGACTGCC GCCGACGCAC GACCCTTTCT GGCGGCAGGC
GCCATTGCAG TGCAGGTAGG ATCGGCATTA CTCGCCGATC CGTGGGCAGC GGTGCGCATA
GCAGAGGCGC TGGAGAATGC GCCCTGA
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| Protein sequence | MPSVDLAPNN PYGLPLRAPV MTAAGCLGFG VEYERIIPLK HLGAIVTGSI SLHGRRALPP
LRLVETPGGV LSVGAWRDPG LTRVLREYAP AWAAWETPVI LSVATDHRKV AAALEGVEGI
AGIELTVGDD WSAAVRVVAA VRAVTLLPLL VKLPLHARLI ATARSVVDVG ADAVTIAAPP
RASAADPHTG ELVHGWLSGP AIRPLVLEAV AEVCATLPAP VVACGGIVTA ADARPFLAAG
AIAVQVGSAL LADPWAAVRI AEALENAP
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