| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4405 |
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| Symbol | |
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| ID | 5541918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5656302 |
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| End bp | 5657411 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896503 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001434439 |
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| Protein GI | 156744310 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0571768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.145119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCC CCGCCAACGT CGGCATTATT GGCTGTGGCA ACATCAGCGG CATCTACCTG
GAAAATAGCA GGATGTTCGA CGCGCTCAAC GTCGTCGCCG TGGCGGACAT CGATCCGGAT
CGGGCGCAGG CGCGCGCGGC GGAGTACAAC GTTCCCAAAG CGTGTAGTGT CGAGGAATTG
CTGGCCGATC CCGACATTGA GATTGTCATC AACCTGACCA CCCCCGATGC CCATGGTCCG
GTCGCGCTTG CAGCCTTGAA CGCCGGCAAG CACGTCTATA ACGAAAAGCC GCTTGCCGTC
ACCCGCGACG AGGCGCGCGC ATTGCTCGAT CTCGCTGAAC GCAAAGGGCT GCGTGTCGGC
TGTGCGCCCG ATACGTTCCT CGGCGGTGGG TTGCAGACCT GCCGTAAACT GATCGATGAC
GGCTGGATCG GTGAGCCGAT CGGGGCGACG GCTTTCATGA TGAGCCACGG ACCAGAAAGC
TGGCATCCGA ACCCCACATT TTTCTACCAG CCCGGCGGCG GTCCGATGTT CGATATGGGA
CCCTATTACC TGACGGCGCT CTGTGTGCTG CTTGGTCCGG TGCGACGGGT GACCGGCTCG
GCGCGTATAT CGTTCGCGGA ACGCACGGTG ACCGGCGAGC GCAACTATGG CGCAACGATT
CCGGTCAACA CCCCGACGCA TGTCGCCGGT GTGCTCGATT TCGCTTCTGG CGCAGTGGCA
ACAATCATCA CCAGTTTCGA TGTCTGGAGT TCGCAATTGC CGCGCATCGA GATTTACGGT
TCGCACGGCA CGCTGAGCGT TCCCGACCCG AACACCTTCG ATGGTCCGGT GCTGTTGCGC
CGCGCCGGTG CGCGCGAGTG GTCGAGCATA CCGCTGTCGC ATGGTTTCAC CCGCAACAGT
CGCGGCATCG GCGTAGCAGA CATGGCGACC GCCATCCGAA CGGATAGACC GCATCGCGCA
TCCGGCGAAC TTGCGTACCA TGTGCTCGAC ATTATGCACG CCATTCATGA TGCATCGCGC
GAGGAGCGTC ACATCTTGTT GCGCAGCGCG ATGACCCGCC CGAAGCCGCT GCCGCTCGGT
CTTGGCGAGC GTGGCGTTGA TGCGGAGTGA
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| Protein sequence | MITPANVGII GCGNISGIYL ENSRMFDALN VVAVADIDPD RAQARAAEYN VPKACSVEEL
LADPDIEIVI NLTTPDAHGP VALAALNAGK HVYNEKPLAV TRDEARALLD LAERKGLRVG
CAPDTFLGGG LQTCRKLIDD GWIGEPIGAT AFMMSHGPES WHPNPTFFYQ PGGGPMFDMG
PYYLTALCVL LGPVRRVTGS ARISFAERTV TGERNYGATI PVNTPTHVAG VLDFASGAVA
TIITSFDVWS SQLPRIEIYG SHGTLSVPDP NTFDGPVLLR RAGAREWSSI PLSHGFTRNS
RGIGVADMAT AIRTDRPHRA SGELAYHVLD IMHAIHDASR EERHILLRSA MTRPKPLPLG
LGERGVDAE
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