Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4385 |
Symbol | |
ID | 5541898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5636811 |
End bp | 5637677 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640896485 |
Product | formate dehydrogenase family accessory protein FdhD |
Protein accession | YP_001434421 |
Protein GI | 156744292 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACCC AACCCAACGT GCAACGGCGC ACTGTCATTC GGGTGCGCGA CGGACAACTG ACGCGCGACC GGGATACGCT GGTCGTCGAA GAACCGCTGG AGATTCGCCT GGCGCTCCAC ACTGCCGATG GCGTCCACCT CATTCCGCTG ACGACGACCC TGCGCACGCC GGGCGCAGAC GTTGAACTGG CTGCCGGGTT TCTGTTCAGC GAAGGCGTCG TGCGTGAGCG GAACGACATC GCCACCATTC GCGCCTGCAC CGATCCCGAC ATCGACGAAG AGGAGGCGCG CTTCAATACC CTCACGGTTG ATCTGCGTCC GGGGGCGCAA CCCGACCTGA CGCGCGCTCG ACGCCTGTTT TACGTCTCGT CGTCGTGCGG CGTCTGCGGC AAGGCGTCGC TCGATGCGTT GCGCACTCGC GGCTGTGTTC CGCTGCCCGA TGACGATGGA GTGCGCATTT CGCTTTCGGT GCTGGCAGGC ATGGATGCGG CGCTTCGTCG GGCGCAGGCG CTCTTCCATA AAACCGGCGG TCTTCATGCC GCTGCGCTGT TTGCCGTCGA TGGCGCGCTG CTCGCATTGC ACGAGGACAT TGGTCGCCAC AATGCGGTGG ACAAACTGAT CGGCGCGCAC CTGCTCCAGG GGCGCCTGGC TGCGTTGACC CGGTCGATCC TGTTGGTCAG CGGGCGCGCC GGGTTCGAGA TTGTGCAGAA AGCGCTGATG GCGCGCATAC CAATCGTTGC GGCGGTTGGC GCGCCATCGA CCCTGGCAGT CACTCTGGCG CAGCAGTTCA ACATGACCCT GATCGGATTC CTGCGCGGTG CGTCGTGCAA TGTGTACGCC GGTGAGCAGC GAATCTCAAT AGAGTGA
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Protein sequence | MLTQPNVQRR TVIRVRDGQL TRDRDTLVVE EPLEIRLALH TADGVHLIPL TTTLRTPGAD VELAAGFLFS EGVVRERNDI ATIRACTDPD IDEEEARFNT LTVDLRPGAQ PDLTRARRLF YVSSSCGVCG KASLDALRTR GCVPLPDDDG VRISLSVLAG MDAALRRAQA LFHKTGGLHA AALFAVDGAL LALHEDIGRH NAVDKLIGAH LLQGRLAALT RSILLVSGRA GFEIVQKALM ARIPIVAAVG APSTLAVTLA QQFNMTLIGF LRGASCNVYA GEQRISIE
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