| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4277 |
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| Symbol | |
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| ID | 5541788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5518731 |
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| End bp | 5520161 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896384 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_001434322 |
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| Protein GI | 156744193 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0376331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0408135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCTG TCTCTCGTAA TGCGCCGTCA CGCCGCGCTC AGGTGCGTGA ACGCCTCCTT
GCTGCGCTGA CCGGCAGCGT TGATCCCGAT ACGCTCGCAT TGCGGATCGA TCAGTTATTG
GCAGAGGTGT TCGAGGACGA GCCGGTTTTG CAACCACAAC CGGCGCTGAT CGATCAGGGC
GATGAGGATA GCCGCGTTGT CGTCACCGGT ATGGGTGTCG TCACGCCGCT CGGCAACGAT
CTGGCGACGT TCTGGCAGGG GCTGGCGGAA GGGCGCAGCG GCGTCGGTCC GATCACGTTG
TGCGATCCCG GCGATGCAGC GACTACCATT GCCGCTGAGG TGCGCAATTT CGATGCGCGC
GATTTTATGG ATGCCAAAGA AGCGCGGCGG GTCTCACGCG GTACGCAGTT TGCCGTCGCT
GCGGCGCGCA TGGCGCTCGA CGATGCGCGC CTGACGGTTG ATGAGAGCAA TCGGTATGAT
ACCGGCGCGC TGATTGCCTG CGGCAGCACC TCACCACCCG ATACGGAGGC AGCCGCCAGA
ATCCTCTTCG AGCGCGGCGC CGCGCGGATT AGCCCGTTCT ATATCACGAG CGCGTTGCCC
AATATGCCGT CGTGCCAGGT TGCCATTCAT CTGGGATTGA TGGGGTACAA CACAACCATT
GCCACTGCAT GCGCCGCAAG CGCGCAGGCA ATCGGCGAAG CGGCTGAGGT TATCCGTCGC
GGCGAGGCGA CGATTATGCT GGCAGGCGGC ACCGAAGCGC CGATCTGCCG CCTTACCCTC
GCCAGTTTTG GCGCTATTCG GGCGCTCTCG ACGCGCAATC ACGATCCAAC CGGCGCGTCG
CGTCCGTTCG ATGCCGAACG GGATGGGTTC GTGCTTGGCG AAGGCGCCGG CGTGCTGGTG
CTCGAAACCC TCTCCCATGC CCGGCGACGC GGTGCGCGCA TCTATGCTGA GATTATCGGC
TATGCATCGA CGTGCGATGC CCATCACGTT ACAGCGCCAC ATCCGGTCGG CGACGGGGCT
GCGCGCGCAA TTATGCGCGC ATTGGCGCGG GCGAAGATGA CGCCACAGCA GATCGATTAT
ATCAATGCTC ATGCGACCGG GACGCCTACG GGTGATGTCG CCGAAACGCT GGCGATCAAG
ACGGCGTTTG GTGAGTATGC TTCCAGTGTG CCGATCAGTG CCACCAAGTC GATGATCGGA
CACCTGACGA GCGCCGCAGG GGCGGTGGAG GCGGCAGCGA CGATCCTTGC CATGCAGCAT
CAGTTCATTC CGCCGACGAT TAATCTCACG TCGCCCGATC CGCAGTGCGA TCTCGATTAT
GTTCCGCTGC ATGGGCGACC GGCGACGATT CGGATTGCCA TGTCCAACTC GTTTGGGTTC
GGCGGGATCA ATAGCGTTCT GGTGCTGCGG CGTGGTGATC TCTACCAGTA G
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| Protein sequence | MPPVSRNAPS RRAQVRERLL AALTGSVDPD TLALRIDQLL AEVFEDEPVL QPQPALIDQG
DEDSRVVVTG MGVVTPLGND LATFWQGLAE GRSGVGPITL CDPGDAATTI AAEVRNFDAR
DFMDAKEARR VSRGTQFAVA AARMALDDAR LTVDESNRYD TGALIACGST SPPDTEAAAR
ILFERGAARI SPFYITSALP NMPSCQVAIH LGLMGYNTTI ATACAASAQA IGEAAEVIRR
GEATIMLAGG TEAPICRLTL ASFGAIRALS TRNHDPTGAS RPFDAERDGF VLGEGAGVLV
LETLSHARRR GARIYAEIIG YASTCDAHHV TAPHPVGDGA ARAIMRALAR AKMTPQQIDY
INAHATGTPT GDVAETLAIK TAFGEYASSV PISATKSMIG HLTSAAGAVE AAATILAMQH
QFIPPTINLT SPDPQCDLDY VPLHGRPATI RIAMSNSFGF GGINSVLVLR RGDLYQ
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