Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4247 |
Symbol | |
ID | 5541758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5489846 |
End bp | 5490298 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640896354 |
Product | hypothetical protein |
Protein accession | YP_001434292 |
Protein GI | 156744163 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.219029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCAC AATTCATCCG TCCCATTGTC TGGGTGCACG GCGATTGCCT GAGTCCATAC GGACCGGCGC TTCAGGCGCA TCCCGGCGCA CCGGCAATTT GGGTGTGGGA CGATGCCCTG CTGGAAGAAT GGCGAATTTC GCTGAAACGG ATCGTCTTCA TCTACGAGTG CCTGCTGGAG TTGCCGGTCG TCATCCGGCG CGGCGATGTT GCGAGCGAGG TGCTGGCTTT CGCCCGCGAG CACGCCGCCG ACGGAGTCGC CACTGCCTTC AGCCCCAGCC CGCGCTTCCG CGCCATCTGT GATCGCCTGC GGGATGCACT CCCCGTCGCC GTGTTGCCGG TCGAGCCATT TCTGGCGTAT ACTGGGCGCC TGGACCTTCG CCGCTTCTCA CGCTACTGGG CAACGGCGGA GAAGTACGCT TTTGGCCAGT TGCCGCTCTT CGACGACCAA TGA
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Protein sequence | MTPQFIRPIV WVHGDCLSPY GPALQAHPGA PAIWVWDDAL LEEWRISLKR IVFIYECLLE LPVVIRRGDV ASEVLAFARE HAADGVATAF SPSPRFRAIC DRLRDALPVA VLPVEPFLAY TGRLDLRRFS RYWATAEKYA FGQLPLFDDQ
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