Gene Rcas_4247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4247 
Symbol 
ID5541758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5489846 
End bp5490298 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content63% 
IMG OID640896354 
Producthypothetical protein 
Protein accessionYP_001434292 
Protein GI156744163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.219029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAC AATTCATCCG TCCCATTGTC TGGGTGCACG GCGATTGCCT GAGTCCATAC 
GGACCGGCGC TTCAGGCGCA TCCCGGCGCA CCGGCAATTT GGGTGTGGGA CGATGCCCTG
CTGGAAGAAT GGCGAATTTC GCTGAAACGG ATCGTCTTCA TCTACGAGTG CCTGCTGGAG
TTGCCGGTCG TCATCCGGCG CGGCGATGTT GCGAGCGAGG TGCTGGCTTT CGCCCGCGAG
CACGCCGCCG ACGGAGTCGC CACTGCCTTC AGCCCCAGCC CGCGCTTCCG CGCCATCTGT
GATCGCCTGC GGGATGCACT CCCCGTCGCC GTGTTGCCGG TCGAGCCATT TCTGGCGTAT
ACTGGGCGCC TGGACCTTCG CCGCTTCTCA CGCTACTGGG CAACGGCGGA GAAGTACGCT
TTTGGCCAGT TGCCGCTCTT CGACGACCAA TGA
 
Protein sequence
MTPQFIRPIV WVHGDCLSPY GPALQAHPGA PAIWVWDDAL LEEWRISLKR IVFIYECLLE 
LPVVIRRGDV ASEVLAFARE HAADGVATAF SPSPRFRAIC DRLRDALPVA VLPVEPFLAY
TGRLDLRRFS RYWATAEKYA FGQLPLFDDQ