Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4244 |
Symbol | |
ID | 5541755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5484508 |
End bp | 5486124 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640896351 |
Product | hypothetical protein |
Protein accession | YP_001434289 |
Protein GI | 156744160 |
COG category | [R] General function prediction only |
COG ID | [COG1106] Predicted ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.777185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGC GTATCGTTAT TCATCGCTTC CGTGGCATTC GCCAGGGCGA TCTCAACCAT CTGCGGAAAT TTAATCTGTT TATCGGACCA AACAACAGCG GCAAGACCGC CATCCTCGAA CTGCTCTACC TGAGCGCAAC GAGTGGGCGA CCGGTTCAGT TCATCCGCGA CGATCTGCTG CCTGCCGAGA CCGGTGTGCT CAGAGCGACG ACATCGGCGC GCAGCGATCT GCTGGGCTAC GAGCCGCTGC CATACTTGCG CCAACGTCAT GGCAAGCACG GCGAGTGGGC CGGCAATCCG GCGGTGGTGA CACCAGAAGG CGGGTTGGAG ATCAACTTGC GCCGTGTGCC GAATAGCGAT GGCGCCCCTC CGTGGAACTC CTTTCGGCTG GCCGCACCAC TACCGGACTG GGGTGAGCAG GATGTGTATG CGTTTCGCAA GGAAGATATT GCCCGCATTG CGATGTTCAC CCTGCCGCAG CCAACGACGC TTGACCCCAG TATGATCCCA CCCACGATTG CCGAGGCCGG AGTCAGACCT GCCGGCGCAG CCACCGACAC GACCACCGCC GCACCGACAC CAATAACCGG TACAGCGACC GAAGCAGAGG AGGTGGGCAG CGCAGCCACT GACACGACCA CCGACACGAC CACTGACACG ACCACCGACA CGACCACCGC CGCACCGACA CCAATAACCG GTACAGCGAC CGAAGCAGAG GAGGTGGGCA GCGCAGCCAC CGACACGACC ACCGCCGCAC CGACACTAAC AACCGGTACA GCGACCGAAG CAGAGGAGGT GGGCAGCGCA GCCACCGACA CGACCACGAC GCCGATCTCC GATTGGCACT ACCTCTGGGA ACCGGACTGG GTGTACCGTT GGGATCGACA GGAACCCATT GATCGCCTGG CGGTCTGGGT CACGCAAGGA CGACGACCAC AGCCGCAGCA GGTCGTGTTC TTTTCCTCAC AGACGGCGAA TAGCCATTTC ACCGACCACT TTGCCAAGTG GGCCTATCAC AACGTCAAGG ACTGGCACGA AACGCTTGCC GAGCGGATGG CGCAGGTGTT TCCGGCACTG AAGGGAGCCA AGATTGAGGT GCTTGACGCG CCCGACGACC AACCGGGCCG AACCGGCTAT GTGCGCTTTC CGAACCGAAC GCCGCTGGCC ATCGATCAGT TCGGTGACGG CGCCCGTCAT GCGTTCAAGT TGCTCGCTGC CCTCACCGCC TTAGCCGCGA CGGTTGATGA CGATCATCCC GGCTTGCTCT TGTGGGAGGA GCCAGAGGTG TATATGCACG CAGCAACGCT CAACCGTCTG TTGCGCAGCG TAGCCGATAT TGTTGCTCAA AAGCCGATTC AAGTATGCAT CACTACCCAG AGTCTGGAAG TTCTGGCGTG GCTGATTCTC TATCTTGATC AACAACCGGC CATGCAACCG GATCAGATCA GCACGTTGCA TCTCAACCTG AAGGATGGAC AGTTGCACGT GCGTCCATTT ATTGGCAAAG CGCTCGGCGG ATGGTTCGAT TTCTTTGGTG ATCCGCGCCT GATTGAAGAA GACGAACTGG CTTCACCGCT GACACGCCTG TTGAGCATTC GGGAGGAACG TGAATGA
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Protein sequence | MIERIVIHRF RGIRQGDLNH LRKFNLFIGP NNSGKTAILE LLYLSATSGR PVQFIRDDLL PAETGVLRAT TSARSDLLGY EPLPYLRQRH GKHGEWAGNP AVVTPEGGLE INLRRVPNSD GAPPWNSFRL AAPLPDWGEQ DVYAFRKEDI ARIAMFTLPQ PTTLDPSMIP PTIAEAGVRP AGAATDTTTA APTPITGTAT EAEEVGSAAT DTTTDTTTDT TTDTTTAAPT PITGTATEAE EVGSAATDTT TAAPTLTTGT ATEAEEVGSA ATDTTTTPIS DWHYLWEPDW VYRWDRQEPI DRLAVWVTQG RRPQPQQVVF FSSQTANSHF TDHFAKWAYH NVKDWHETLA ERMAQVFPAL KGAKIEVLDA PDDQPGRTGY VRFPNRTPLA IDQFGDGARH AFKLLAALTA LAATVDDDHP GLLLWEEPEV YMHAATLNRL LRSVADIVAQ KPIQVCITTQ SLEVLAWLIL YLDQQPAMQP DQISTLHLNL KDGQLHVRPF IGKALGGWFD FFGDPRLIEE DELASPLTRL LSIREERE
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