Gene Rcas_4204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4204 
Symbol 
ID5541715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5437672 
End bp5438091 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content56% 
IMG OID640896311 
Producthypothetical protein 
Protein accessionYP_001434249 
Protein GI156744120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0362071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.17374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGA TCGTTCGCAC AACACGGCAT CGTTACATCG TACCGCGTGA AGACGTTGCA 
ACCCTCCGCG CTGTCAATCG ACGCCCTGGC AATGACCATG AGACCGACGA GAATCAATCC
TCCATTACCG TGGAATTAGG AGCGCTTCTC GACCCGGAAG ATGTCAGCAC GATGCAACGA
CGGCACGCTT TGATCATTCC CCTGCGGCGA CGCACGATTG CGCTACTCGT CGATGCAGTG
GATAATCTGG TCGATCATGC GGCGGTTCAA CCATTGCCGC CATTGTTGCG CGAGCGCTTG
CGTGAACCGT GGGCAACCGG TGCGCTCATT GTAGACGAGC ATCCCATCGT GCAGCTTGAT
GTACGAGCGA TTGCGCGCAG CGTGCTGCTG AGAAGAACCC ATGATGCAGA ACAGAAGTGA
 
Protein sequence
MLLIVRTTRH RYIVPREDVA TLRAVNRRPG NDHETDENQS SITVELGALL DPEDVSTMQR 
RHALIIPLRR RTIALLVDAV DNLVDHAAVQ PLPPLLRERL REPWATGALI VDEHPIVQLD
VRAIARSVLL RRTHDAEQK