| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4141 |
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| Symbol | |
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| ID | 5541652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5361925 |
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| End bp | 5363790 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640896252 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001434190 |
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| Protein GI | 156744061 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.666658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0171825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA TGTGGCGAAG GGCGGGCGTG ATGGCGGCAA TCGCGCTCGG CGTCATGCTA
ATCGGGACGA GTATCGCGCT CACGCAGGAA CGCCTCGGGC GCTGCGCGGT TGTGCCGTTG
CTTGCCGGCG ATCTGTTAGC AGCGCCCGAT TTTGCGAACC TGGCGCCAGG CGCCCCATCC
GGCGTGCTGC TGCCGGTCGG GTGGAGTGCG GCAGCAACCG GCGTGCAGAT CGGCGACTTT
ACCGTTTCCG GTCGTGGGCG TTCGTTTCAG TTGCTCGGCA TTGCCAACCA TCTGCGCACC
CCTGATGTTG CTGTGCGCCC TGGCGCGTCG TACTGCGCCG TCGCGCAGGC GCTCGCCGAT
TCGGTCTCAG CGACGCAGGT GCGTCTGGGG TTTCACTGGA TCGACGCCGG AGGCGATGTT
CTGCGCACCG ATTGGAGTGG CTGGCAGGAG GTGCGGCGCT GGAATGGACC CGCCGATGTG
CAGCCCTGGT CGCAGATTGG CGGTGGGTTT ATTGCTCCTG CCGGCGCAGT GCGTCTCACG
GTCTCGTTCC ATCCCGCCTC TGATGACCGG ATATACCTGG ATACGATCCG CATCCGTCCA
GGACGCTTTC CGGCTTCTGG CGAGATGCCG CCGCAGTCGC CAGAGCGACC GACTGGAGTG
ACAGTGCTTC CCTGGCCCAA CGGCGCGCGC GCGGCGCTCT CATTTTCGTT CGACTGGGAA
ACGACGATGG GCGGGTTGAT CCACTCACGC TCGGTTGATG ACCCGAACTT CGATCAGGAT
CCGGTGCTGC GCGGGATGCG GATGCGCGAG GGGGTGACGA CCACCGTGGA CCTCTTCCGT
CCCTACGGCA TCCGCGCCAC GTATTATGCG ACGGGGTACA ATTTCCTGAG CGGTAACCGT
GAACGGCGAC GCTTTATGGG CGATCCGACG TTTGCCTGGG CGAACCGCGC CAATCGCTGG
CAGACCGACG CCTGGCAGCA GCAGCCCTGG TTCTCGCCCG ATCCGTATGG CACGGTCGCA
ACCGATCCCG CCTGGTACTT TGGCGACCTG ATTCCGATCT TGCAGCATGA GGGACACGAT
ATTCAGAGCC ATACGTTCAG CCATCTGTAT GGTGGGCTTG CCAGCGCCGA GGAGTGGCGC
AGCGACCTTT CCGAGTGGCG TGCCGTTGCC GCAGAACGTG GCGTTCCATC AGCGCGGTCG
CTGGCGTTTC CCTGGAGCAG CAGCGCCGGA ATGAGTTACG CAAACTGGCA GGCGCTGGCA
GAAGCGGGCA TCACATCGGT CACCCGCACC AACTGGAATC CGCGCCAGCC GCAGTATCAC
CTTGTGAGCC GGGAGGATCC GCACTGCCGC CCCATTCCAG GGCACGAAAC CATTCTGGCA
TGCCCGGATT TCTACCTGAC CGAACGCAGC GCTGCGCAGG CGCCGGACGT GATTGAGCGG
GCAATTGCCG CCGGTGGCAT GATCGACCTG TGGGCGCATA CGGAGGAGGT GGTCAGCCCG
GCTCAGATTG CCGCCTGGAG CGAGGTGGTG CGGTACGCTG CCGCGCGCCG TGACGCTGGC
GATCTCTGGA TCGCGCCGCT GGCAGAGATT GCCGACCGGC AGCAGGCAGT GGCGCAGGTG
CATGTCGAGG AGCACAAATC CGAACCCGTG AACGCCGATT CTTTCCAGGC AGCGCCTTTG
CGTCTGGCAG TGACCAATCG CAGCGCGCGC AATCTGGCAG GATTGACGCT CAGGTTGCCC
TTCGACGCGC ATCGGGCGAC GGTGCAGCAC GCGAATGACG CCGTCAACCC CCTCATTCGC
GGCGCGATGC TGGTCTTCGA TCTGGCAGCC GGCGAGACAG TCGAGGTGAC CGTATGGCCG
GCATAG
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| Protein sequence | MTEMWRRAGV MAAIALGVML IGTSIALTQE RLGRCAVVPL LAGDLLAAPD FANLAPGAPS
GVLLPVGWSA AATGVQIGDF TVSGRGRSFQ LLGIANHLRT PDVAVRPGAS YCAVAQALAD
SVSATQVRLG FHWIDAGGDV LRTDWSGWQE VRRWNGPADV QPWSQIGGGF IAPAGAVRLT
VSFHPASDDR IYLDTIRIRP GRFPASGEMP PQSPERPTGV TVLPWPNGAR AALSFSFDWE
TTMGGLIHSR SVDDPNFDQD PVLRGMRMRE GVTTTVDLFR PYGIRATYYA TGYNFLSGNR
ERRRFMGDPT FAWANRANRW QTDAWQQQPW FSPDPYGTVA TDPAWYFGDL IPILQHEGHD
IQSHTFSHLY GGLASAEEWR SDLSEWRAVA AERGVPSARS LAFPWSSSAG MSYANWQALA
EAGITSVTRT NWNPRQPQYH LVSREDPHCR PIPGHETILA CPDFYLTERS AAQAPDVIER
AIAAGGMIDL WAHTEEVVSP AQIAAWSEVV RYAAARRDAG DLWIAPLAEI ADRQQAVAQV
HVEEHKSEPV NADSFQAAPL RLAVTNRSAR NLAGLTLRLP FDAHRATVQH ANDAVNPLIR
GAMLVFDLAA GETVEVTVWP A
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