| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4116 |
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| Symbol | |
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| ID | 5541627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5327651 |
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| End bp | 5329321 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640896228 |
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| Product | phosphoenolpyruvate-protein phosphotransferase |
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| Protein accession | YP_001434166 |
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| Protein GI | 156744037 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.023683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCT ATCTTCGAGG CGCTGGGAGT TCACCGGGAG TGGCGCTTGG GCGTGCGGTG
CGCTACCTCC CCGATAGCCA CGCCTGGCAT GCGGTTGATG CCGACATCGA TGCCGCAATG
GCGCGTTTCA CAGCAGCTCA GGCAATGGCT GCCACGCAAA TGCGCACGCT GGCAGAGTTG
TTGCGTGAAG AAGGACGCAT CGAAGAGGCG CGCATTTTTG ACACCCATGC GCTCCTGGTT
GAAGATGAAA TCCTGACGCA GGACGTAGAA CGGCGTATGC GCGCGGGGCG CATCAGTCTG
GAGCAGGCGC TGATCGCCGC CATCGATTCG CTGCGCGACG CCGTCGATGC CATCGACGAC
CCCTATCTAC GCGAACGTTC CAGCGACATC GACAGCGTGC GGCGCGCTAT TCTGACGGCG
CTGCACGGCG AAACCCGCCG CATTCGCGAT CTGCCGATCG GCGCCATTCT GGTGGCGAAT
GACCTGACGC CAGCGGAAGC GGTCAGCCTG CGCGATGGAC GGATCGCCGG ATTCGCAACT
GCCGAGGGTG GACCGACCAG CCATACGACG ATCCTGGCGC GCGCCTTTGG CATCCCGGCG
GTTGTCGGGT TGGGCGCAGC AACGCTGGCG GTTCCCGATG GCGCGCCACT GGTGCTCGAC
GGATACACGG GACTGCTGAT CGTCGATCCT GACGCCTTTG AATGGTCCTC CTACGAACGT
CGCGCGTCCG CGCTGGTAAC GGCGCCGGTT CGGCGACAAC CGTCACGCGA TCAACCGGGG
CGCCTGGCAA GCGGCGAGCC GGTGACCATC TGGGCAAATA TCAACCATCC GCTCGAGGCG
CGTATCGCCC TCGAACAGGG AGCAGAAGGC ATCGGACTGT TTCGCACCGA GTTTCTCTTC
CTGGGGCGTA GCACTCCGCC CGACGAGAAC GAACAGTACG AGGCATATCG CGCCGTAGTC
GAGATGATGG AAGGGCGCCC GGTCATTATC CGCACCCTGG ACATCGGCGG CGATAAGCGA
GTGGAGTACC TCGACCTGCC GCACGAACCC AATCCCTCAC TCGGTATCCG TGGGCTGCGC
CTGGCAATGC GTCGGCCCGA TCTCTTCCAG ACACAGATTC GCGCTATGCT TCGCGCTGCA
ACGCACGGCG ATCTGCGTAT CCTGTTGCCG ATGGTCGCCA TACCGGACGA AGTGACATGG
GCACGTGAAC AGATCCACAG CGCCGCCGAG TCGCTGGCAC GTCAGGGCAT TCCTCACCGT
GCTGACGTGC CTGTTGGCGT CATGATCGAA ACGCCAGCCG CAGCAATCAC TGCCGATCTG
CTGGCGCGCG AGGCGGCGTT CTTCAGCATT GGCACCAACG ACCTGGCGCA GTACGCGCTT
GCTGCCGACC GCACGAGCGC CGATGTGTCT GCCCGATACT CCCAGACATC CGCTGCTATC
CTGCGCCTGA TTGCGCAGAC CGTCGGCTCT GCCATTCGCG CTCGTTTGCC GGTGTGTGTC
TGCGGCGAGA GCGCCGGTGC GCCGGATGTG GCGCCGCTCC TGATCGGGTT GGGCGTGTCA
CAATTGAGCA TGAACCCGGC GAGCATTTCC ATTGTCAAAG AGCGTCTGAG CGAGACGATG
ATGACGCAGG CGCAGGCGGC GGCGCACGCA GTGTTGAACA TTTACATATG A
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| Protein sequence | MAIYLRGAGS SPGVALGRAV RYLPDSHAWH AVDADIDAAM ARFTAAQAMA ATQMRTLAEL
LREEGRIEEA RIFDTHALLV EDEILTQDVE RRMRAGRISL EQALIAAIDS LRDAVDAIDD
PYLRERSSDI DSVRRAILTA LHGETRRIRD LPIGAILVAN DLTPAEAVSL RDGRIAGFAT
AEGGPTSHTT ILARAFGIPA VVGLGAATLA VPDGAPLVLD GYTGLLIVDP DAFEWSSYER
RASALVTAPV RRQPSRDQPG RLASGEPVTI WANINHPLEA RIALEQGAEG IGLFRTEFLF
LGRSTPPDEN EQYEAYRAVV EMMEGRPVII RTLDIGGDKR VEYLDLPHEP NPSLGIRGLR
LAMRRPDLFQ TQIRAMLRAA THGDLRILLP MVAIPDEVTW AREQIHSAAE SLARQGIPHR
ADVPVGVMIE TPAAAITADL LAREAAFFSI GTNDLAQYAL AADRTSADVS ARYSQTSAAI
LRLIAQTVGS AIRARLPVCV CGESAGAPDV APLLIGLGVS QLSMNPASIS IVKERLSETM
MTQAQAAAHA VLNIYI
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