Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4057 |
Symbol | |
ID | 5541568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5266468 |
End bp | 5266797 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640896169 |
Product | ATP-dependent Clp protease adaptor protein ClpS |
Protein accession | YP_001434107 |
Protein GI | 156743978 |
COG category | [S] Function unknown |
COG ID | [COG2127] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0910653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0581453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTG AAGTTTCGGT TCCGCTCACG ACAACCATCC CAACGACTGA ATATGTCGTG GTCACCGAAG AAGAACTTGA ACGCCCATAC CGTGTCATCA TCGAAAACGA CGATGTCACG CCGATGGACT TTGTGGTTTT GGTGTTGCTG ACGATCTTCG AGTTGGGATT CGAGCAATCA GTTGCTATCA TGCTTGAAGC GCACCACAAC GGACGGGCGC ACGTTGTGAC GCTTCCCTAC GAGGAAGCGC AGCGCCGCGT TTATGAGGCG CACCACGCGG CGCGTGAAGC GGGCTATCCG CTCAGTTTCT ACCTTGAGCC GGATGCGTGA
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Protein sequence | MSAEVSVPLT TTIPTTEYVV VTEEELERPY RVIIENDDVT PMDFVVLVLL TIFELGFEQS VAIMLEAHHN GRAHVVTLPY EEAQRRVYEA HHAAREAGYP LSFYLEPDA
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