Gene Rcas_4057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4057 
Symbol 
ID5541568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5266468 
End bp5266797 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content55% 
IMG OID640896169 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_001434107 
Protein GI156743978 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0910653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0581453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTG AAGTTTCGGT TCCGCTCACG ACAACCATCC CAACGACTGA ATATGTCGTG 
GTCACCGAAG AAGAACTTGA ACGCCCATAC CGTGTCATCA TCGAAAACGA CGATGTCACG
CCGATGGACT TTGTGGTTTT GGTGTTGCTG ACGATCTTCG AGTTGGGATT CGAGCAATCA
GTTGCTATCA TGCTTGAAGC GCACCACAAC GGACGGGCGC ACGTTGTGAC GCTTCCCTAC
GAGGAAGCGC AGCGCCGCGT TTATGAGGCG CACCACGCGG CGCGTGAAGC GGGCTATCCG
CTCAGTTTCT ACCTTGAGCC GGATGCGTGA
 
Protein sequence
MSAEVSVPLT TTIPTTEYVV VTEEELERPY RVIIENDDVT PMDFVVLVLL TIFELGFEQS 
VAIMLEAHHN GRAHVVTLPY EEAQRRVYEA HHAAREAGYP LSFYLEPDA