Gene Rcas_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3994 
Symbol 
ID5541504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5208004 
End bp5208777 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content59% 
IMG OID640896106 
Productinositol monophosphatase 
Protein accessionYP_001434045 
Protein GI156743916 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000574883 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCGACA TCGATATTGA AGAACTATGC GCCTGGATGC GCGAATGCGG CGACGTCGCG 
CTTCACCTGT TCAATCGTGC CAGAGCGCAG CGCAAATCCG ACAACAGTCC GGTCACCGAG
GCGGATGTTG CAATCGAGCG AATCCTGGTC GAGCGAGTGA CGGCGCGCTA TCCAGACCAT
GGCATCATCG GTGAAGAGCA GACGCGATTT GCCATCACAC AAGAATATGT CTGGGCGCTG
GATCCGATCG ACGGAACGGC GTCGTTTGTG GCCGGGTTGC CGGTGTGGGG CATTTCCATC
GGGTTGCTGC ATCGTGGTAT TCCCTATGCG GGGATCTTTT ACATGCCGCT AACCGACGAC
TGCTATTGGG CAATCGACAA TCGCGCATTC CTGAACCATC GACCACTATC CATTCATCCA
ACGTCAGAGC AGGAATGGGA GAGTGAAGAT TGGTTGGCCA TCCCTTCTGA TGCTCACCGG
CGCCTCGAAA TCGATTTTAT CGGTAAAACG CGCAGTCTGG GTTCTGCTGC GGCTGCCATC
TGTTATGTCG CGCGCGGTTC AGCGCTTGGC GCCGTTCTGA CACACGCAAC CATTTGGGAT
GTGGCGGGTA GCATTGCCGT TCTGCGTGCA GCCGGCGGGG TCGGCATAAC GTTAGCGGGT
GCGCCTTTTG AGCCTGCTGC AATCATCGAT GGTCGGGCGG TGCGTGAGCC GCTCCTGTTC
GGCGCTCCTG GCACGGTCGA AGCGTTGCGT CGCCACATCC GGGTGCGTCG CTAA
 
Protein sequence
MIDIDIEELC AWMRECGDVA LHLFNRARAQ RKSDNSPVTE ADVAIERILV ERVTARYPDH 
GIIGEEQTRF AITQEYVWAL DPIDGTASFV AGLPVWGISI GLLHRGIPYA GIFYMPLTDD
CYWAIDNRAF LNHRPLSIHP TSEQEWESED WLAIPSDAHR RLEIDFIGKT RSLGSAAAAI
CYVARGSALG AVLTHATIWD VAGSIAVLRA AGGVGITLAG APFEPAAIID GRAVREPLLF
GAPGTVEALR RHIRVRR