| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3967 |
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| Symbol | |
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| ID | 5541473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5172161 |
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| End bp | 5173504 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896075 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001434018 |
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| Protein GI | 156743889 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.923272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0394514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG AATGGCTGAT AGATCGTATG GCACAATTGC GCAATGATAC GGCCATCGTC
TGGCAGGGGG CGTCGGTTTC CTACGGCGAC CTGATCGACC GTGTGGCGCG CTGGCGCGTG
ATACTCGACG AGGCCGGCAT TGCCGAAGGG CAGGTGGTCA GCATCGAAGG GGACTATTCA
CCCGGCGCGA TTTCGCTCCT GCTGGCGCTG ATTGCGCGCA ATGCCATCAT TGTGCCGCTC
ACGGCGTCGG TTGCAGCGCA CCGTGACGAG TTCCTGTCCA TCGCCGAAGT GCAGGCGGTC
ATCAGTTTCG ATGCTGGCGA TGGATGGCGC ATTGAACGCC GCGACATCCC GGTGACGCAT
GCGTTGACCT GCACACTCAT CACGCGCGGG CATCCCGGTC TGGTGCTCTT CTCATCCGGT
TCAACCGGCA AGAGCAAAGC GGCGTTGCAC GACTTCGTGC CGCTGCTGGA GAAGTTCAAA
GTGCCGCGCC ATCGCCAAGT GACGCTGACC TTTCTGCTGC TCGACCACAT TGGCGGGATT
AACACGTTGT TCTACACACT CTCCAATGGT GGAACCGCCG TGTCGGTGCG CAGCCGCGAT
CCTGATGAGG TTTGCGCTGC GATTGAACGC TATGCGGTCG AATTGCTGCC CACGTCGCCA
ACCTTCCTGA ACCTGATTCT GATGTCAGAG GCATATCGGC GCTACGATCT ATCGTCGCTG
AAACTGATTA CCTATGGCAC CGAAGTGATG CCCGAAACGA CGCTTCAGCG TGTCCGTGAA
GCGTTTCCCG GCGTGCGCCT CCAGCAAACC TACGGTCTCT CCGAACTTGG CATTCTCCGC
TCGAAGTCGC GCGACGACGG TTCGTTGTGG GTCAAAGTCG GCGGCGAAGG GTTCGAGACG
AAGGTGGTGG ATGGCGTGCT CTATGTCCGC GCGAAATCGG CGATGCTCGG GTATCTCAAT
GCGCCAAGCC CCTTCGACGA GGAAGGGTGG ATGAACACAC AGGACATGGT AGAAGTCGAT
GGTGAGTACA TACGGATTCT GGGGCGGCGT ACCGAAATCA TCAATGTCGG CGGGCAGAAA
GTCTACCCGG CGGAGGTCGA AAGTGTGCTC ATGCAATTGC CCAACGTGCG CGATGCAACG
GTCTACGGCG AGAAAAATCC GATCACGGGG CAGATTGTTG CAGCTCGCTT GAACCTGATC
GAACCGGAAG ACCTCGACTC GCTCAAGAAA CGGGTGCGCG CCTGGTGCCG CGAGCATCTG
GCGCCGTTCA AAACGCCGGT CAAAATTACG ATTGCCGACG GCGAACAGTT CAGCGCACGC
TTCAAGAAGA TGCGGCGCGC CTGA
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| Protein sequence | MAIEWLIDRM AQLRNDTAIV WQGASVSYGD LIDRVARWRV ILDEAGIAEG QVVSIEGDYS
PGAISLLLAL IARNAIIVPL TASVAAHRDE FLSIAEVQAV ISFDAGDGWR IERRDIPVTH
ALTCTLITRG HPGLVLFSSG STGKSKAALH DFVPLLEKFK VPRHRQVTLT FLLLDHIGGI
NTLFYTLSNG GTAVSVRSRD PDEVCAAIER YAVELLPTSP TFLNLILMSE AYRRYDLSSL
KLITYGTEVM PETTLQRVRE AFPGVRLQQT YGLSELGILR SKSRDDGSLW VKVGGEGFET
KVVDGVLYVR AKSAMLGYLN APSPFDEEGW MNTQDMVEVD GEYIRILGRR TEIINVGGQK
VYPAEVESVL MQLPNVRDAT VYGEKNPITG QIVAARLNLI EPEDLDSLKK RVRAWCREHL
APFKTPVKIT IADGEQFSAR FKKMRRA
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