| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3942 |
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| Symbol | |
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| ID | 5541448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5148229 |
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| End bp | 5149416 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640896050 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001433993 |
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| Protein GI | 156743864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.484579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.520896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA CTCTGATCGG TCCGACTTAC CCATTTCGCG GTGGCATTGC GCACTACACC
ACGCTCCTGA CCCATCATCT GCGCCAGCAC CACGATGTCC GGTTGATCTC GTACCTCAAG
CAGTATCCCA AATGGCTCTA CCCCGGCAAT ACGGCGATGG ACCCCAGTCC TGATGAGAGT
GCGCTACGTA TCGAGTGCGA CCGGGTGCTG ACCCCGATGA ATCCGCTGAC CTGGTGGCGG
GCCTTTCGCA TGATCCAGCG CGATAACCCT GATCTGTTGC TGCTTCAGTG GTGGACGCCG
TTCTGGTCGC CGATGTTGTT TGTGCTGACC CGGTTGGTGC ACCGGCATAC GAATGTGCGC
ATCCTTTTTT TATGCCATCA CGTCATTGCT CCTGATGGTG GTATGTTCGA CTGGTATCTG
GCGCGGCGTA TTCTCTGGCG TGGGCATGCC TTCATTGTGA TGAGCGAAGA AGATTTCGCA
CTGCTGCGGC GCGCGCTGCC GTGGGCGCGC ATCAAAGGGG TCACCCACCC ACCCTACGAT
GTGTTCAGCC GCACGCCGTT GCCGCGTGCC GACGCGCGCG CCCGCCTTGG TTTGAACGCC
GATGATCCGG TGCTGCTCTT CTTCGGGTTT ATCCGGCGCT ACAAAGGGCT GCGTCATCTG
ATACGGGCGC TGCCGCTGGT TCGTCAGCAC ATTCCTGCGC GATTGTTGAT CGTCGGCGAG
TTCTGGGAGG ATGATCGTCC GTATCGCAGT CTGGTGCGCG AACTCGGTCT CGACGACGTG
GTGCATTTCC ATAGCGAGTA TGTTCCCAAC GAACAGATCG CGGTCTATTT CTCGGCATGT
GATGCGGTCG TACTCCCCTA TCTCGAAGCG ACGCAAAGTG GTGTGGCGCA ACTGGCAATC
GGGTTCGAGA AGCCGATGAT TGCAACGTCG GTCGGCGGGA TGCCGGAGAC CATCCACGAC
GGTGAAACCG GATTGATTGT TCCGCCAGGG GATAGCGTTG CACTGGCGGA TGCCATTGTG
CGCTTTTTCC GTGAGGGGCT GGCTGAACCG TTTGCCCAAA ACATCCGTGT GGCGCGCGAG
CGCGACTCAT GGATGCCGCT GGTGCGCCTG ATCGAAGAAC TGGCGGAACC GTCCGCAGCG
CACGCCGAAC AACCGGCGCC GCAGACGGCG TCGCCGAGGG TGTTGTAA
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| Protein sequence | MKITLIGPTY PFRGGIAHYT TLLTHHLRQH HDVRLISYLK QYPKWLYPGN TAMDPSPDES
ALRIECDRVL TPMNPLTWWR AFRMIQRDNP DLLLLQWWTP FWSPMLFVLT RLVHRHTNVR
ILFLCHHVIA PDGGMFDWYL ARRILWRGHA FIVMSEEDFA LLRRALPWAR IKGVTHPPYD
VFSRTPLPRA DARARLGLNA DDPVLLFFGF IRRYKGLRHL IRALPLVRQH IPARLLIVGE
FWEDDRPYRS LVRELGLDDV VHFHSEYVPN EQIAVYFSAC DAVVLPYLEA TQSGVAQLAI
GFEKPMIATS VGGMPETIHD GETGLIVPPG DSVALADAIV RFFREGLAEP FAQNIRVARE
RDSWMPLVRL IEELAEPSAA HAEQPAPQTA SPRVL
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