Gene Rcas_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3916 
Symbol 
ID5541422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5118572 
End bp5118958 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content64% 
IMG OID640896026 
Producthypothetical protein 
Protein accessionYP_001433969 
Protein GI156743840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0606194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACTTAT ACTGCCCGCT CTGTTTTGCC GAGATCGGTG AGGATCAGCA GGATGCCCCG 
TGTCCCGTGT GTGGTGCAAC GCCTGATGCA TGGCGGCGAC GCGACTACAC CGACCGCCTT
ATCTATGCGC TGCGGCATCC GAACCCCGAA GTGCGCATGG GTGCTATCAT CTCGCTGGGC
AACCGCCGTG AGCCGCGAGC GGCAGTTCCG CTTGCTGAAT GCGCACTGGC GCACCCGGTT
GATGTGGTTC AGGCTCTCGC CATTGTAGAG GCGATCCGTA ACCTTCAGGC ATCACCGGAG
CGCGATGAGG CGCTGAACCT GCTCGCCAGC CACCCGGCGC GCGTCGTGCG TCGGGCAGTG
GCGGGGAAAG GCGAGAGGCA AGGGTAA
 
Protein sequence
MHLYCPLCFA EIGEDQQDAP CPVCGATPDA WRRRDYTDRL IYALRHPNPE VRMGAIISLG 
NRREPRAAVP LAECALAHPV DVVQALAIVE AIRNLQASPE RDEALNLLAS HPARVVRRAV
AGKGERQG