| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3868 |
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| Symbol | |
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| ID | 5541372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5057442 |
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| End bp | 5058293 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895977 |
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| Product | photosystem I assembly BtpA |
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| Protein accession | YP_001433922 |
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| Protein GI | 156743793 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0434] Predicted TIM-barrel enzyme |
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| TIGRFAM ID | [TIGR00259] membrane complex biogenesis protein, BtpA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.732531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.216274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCTC CCTGGAAACA GCGTCTCGAC GCGCTGCGGA TCGGCGATCT CAGCGACATC
TTTCGTACAC CAAAGCCGAT CATCGGCATG GTCCATCTCT GGCCCCTGCC GGGTGCGCCG
GGATACACCG GCTACGGGAT GCAGGGGATC ATCGACCGAG CGCTCGACGA TGCCTACGCA
CTCGCCGACG GCGGCGTCGA TGGCGTGATC GTCGAGAACA TGTGGGACAT CCCGTTCCGC
GCCGGTCTGC ACGTGCAACC AGAGAGCATC GCCGCTCATG CTGTCGCAGC GCACGCTGTT
CATCGGGCCA TCGACCTGCC GCTTGGGATC AACCTGGTGC ACAACGGCGG GGTTGCACTG
CTGGGGATTG CATTGGCGGC AGGCGCTAGA TTCATTCGGG TCTGCATGTT CACCGGCGCA
GGAGTGTGGG ACGCGGGCGC CTGGGACGAA GGGTGCGCCG CCGACCTGAT GCGCCGGCGC
AAAGAACTGC ACGCCGAACA TATCAAAATC TTCGCCGATG TCGATAAGAA ACATTCGGTG
CGCTTCCCTG GAATCGATCT GGCGACCCAT ATCGAATGGA CGCGTTTCTT CGGTGCAGAT
GCCTTGATTG TCTCTGGACG AATGACCGGC AATGCACCCG ATCTGGAGAA GGTGCAGCAG
GCGAAGGCAT TGTGCGGTGA TCGTCCGCTC CTGATCGGGA GCGGCGCCGA TGAACGGAAC
ATTGCCGCTT TTATGGCGGC AGCAGATGGC GTGATCGTCG GGTCGAGCAT CAAACAGGAC
GGTCGGATCG AAAATCCGGT GGAGGTTGAA CGGGTGCGGC GTTTTGTCGC AGCAGCTCGC
TCACGTATGT GA
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| Protein sequence | MTPPWKQRLD ALRIGDLSDI FRTPKPIIGM VHLWPLPGAP GYTGYGMQGI IDRALDDAYA
LADGGVDGVI VENMWDIPFR AGLHVQPESI AAHAVAAHAV HRAIDLPLGI NLVHNGGVAL
LGIALAAGAR FIRVCMFTGA GVWDAGAWDE GCAADLMRRR KELHAEHIKI FADVDKKHSV
RFPGIDLATH IEWTRFFGAD ALIVSGRMTG NAPDLEKVQQ AKALCGDRPL LIGSGADERN
IAAFMAAADG VIVGSSIKQD GRIENPVEVE RVRRFVAAAR SRM
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