| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3855 |
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| Symbol | |
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| ID | 5541359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5038548 |
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| End bp | 5039660 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895965 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001433910 |
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| Protein GI | 156743781 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.552694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.795222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATCA CCGATGTCGA AGCCATCTGG TTGCAGCTCC CAACCGTGGA TGATCGCGCC
GACGGCACCC AGGATACGCT GGTGGTCAAA GTCCACACCG ACGAAGGGAT CGTCGGAGTT
GGCGAGGTCG ATTCGTCGCC AATGGCAGCG AAAGCGATCA TCGAGGCGCC GCTGTCTCAC
CGAATCGCAC GCGGTTTACG GCTCTGCGTG ATCGGCGAGG ATCCGCTCGA TATTGCGCGC
CTGTGGCACG CCATGTACGA GGGATCGATC TTCTTCGGGC GCGGCGGCGC GGCGCAGCAG
GCCATCAGCG GCATCGACAT CGCCCTGTGG GACATTGCCG GCAAGGCGCT GGGGCAGCCG
GTCTACCGAC TGCTCGGCGG CGGCTTCCGC AATCGTCTGC GCGCTTATGC GTCGATTCTG
TTTCAGGAGA CGCCTGAAGC AACGTATGAC CTTGCCCGCC GCCTCGCCGA CCAGGGATTC
ACAGCGGTCA AGTTCGGGTG GGGACCGATG GGAACAAGCG AGAAGACGGA TCTTGCACTG
GTGCGGATGG CGCGGCGCGG GCTGGGGGAC CACCTCGACC TGATGATCGA CGCGGGAATC
TGCTACGACA CGGCCACGGC AATCCGGCGT GCGCATCAGT TCGCGGAATA CAACCCGTTC
TGGCTTGAAG AGCCGCTGCA CCCCGATAAT CTCGAAGGGT ACTCGCGCCT GGCTGCGGTA
TCGCCTATCC GCATCGCTGC CGGAGAACAG GAGACCACCC TGGTCGGATT TCAGGCGCTG
CTGGACGCCG GTCTGGCAGT GGTGCAGCCG GACGTGGCGC GGGTCGGAGG GATATCGCAG
GCAATTCAGA TTGGTCGGAT GGCGATGCAG CGCCACCGTT TGTGCGTCAA TCACTCGTAC
AAGACCGGCA TCAGCATCGC CGCTTCGTTG CACTTCCTGG CGGCGCTGCC GAACGCTCCG
CTCCTGGAGT ATTGCGTCGA GCAGAGTCCG TTGCGGCAGA CGCTTACCCG CGAGACGTTT
CCGGTGGTGG ATGGATGGGT CGCCGTGCCG CAAGAACCAG GGTTGGGAAT CACGCTCGAC
GAAGAGGTGA TCGCCCGCTA CCGCGTGGCG TGA
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| Protein sequence | MKITDVEAIW LQLPTVDDRA DGTQDTLVVK VHTDEGIVGV GEVDSSPMAA KAIIEAPLSH
RIARGLRLCV IGEDPLDIAR LWHAMYEGSI FFGRGGAAQQ AISGIDIALW DIAGKALGQP
VYRLLGGGFR NRLRAYASIL FQETPEATYD LARRLADQGF TAVKFGWGPM GTSEKTDLAL
VRMARRGLGD HLDLMIDAGI CYDTATAIRR AHQFAEYNPF WLEEPLHPDN LEGYSRLAAV
SPIRIAAGEQ ETTLVGFQAL LDAGLAVVQP DVARVGGISQ AIQIGRMAMQ RHRLCVNHSY
KTGISIAASL HFLAALPNAP LLEYCVEQSP LRQTLTRETF PVVDGWVAVP QEPGLGITLD
EEVIARYRVA
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