| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3843 |
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| Symbol | |
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| ID | 5541347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5023605 |
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| End bp | 5024924 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895953 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001433898 |
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| Protein GI | 156743769 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0711014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.172621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGA CGATGACGAA CGCAACGCTG GTCGAGCGCG CCCGGCAGGT GATTCCCGGC
GGGGTGAATT CCGGCAATCG CGTTCTTCCC TGGCCCATTG CGTTTGTGCG CGCCGAAGGC
GCCTATCTGT TCGACGCCGA TGACCGCCAG TATCTTGATT ATCACGCCGC CTTCGGACCG
ATCATTCTCG GACACAACCA TCCTCAGGTG AATGCCGCTG TTGCCGAAGC GATGAGCCGC
ATCGACATCA TTGGAGCAGG CGTCACAGAC CTGGAAGTGG AACTTGCCGA CCGCCTCAAC
CGCCATATTC CCTGCGCCGA GCGCGTCCTG CTGACGAACT CCGGCTCTGA AGCGACGTAT
GCCGCGCTCC GTCTGGCGCG CGCCGTCACC GGGCGCAACA AGATCATCAA GTTTCAAGGG
ACCTACCACG GCTGGCACGA TGCCGTCTTG ATGAATGTCA TCAGCCCGCC GGAAAAGATC
GGTCAGCATG ATCCGCTCTC GCTCGGCATG CTTCCCGATG TGATCCGTCA CACGATTGTG
TTGCCGTTCA ACGATACCGA AGCGGTCGCC GACACGCTGC ACCGCCAGGG TGAGGAGATC
GCCGCCGTTC TTGTGGAGGT GATCCCGCAC AATATCGGGT GTGTGTTGCC ACGGCCGGAG
TTTCTTCAGG CGCTGCGCGA CCTGACGCGC CAGCACGGTG TGATGCTGAT CTTCGATGAG
GTCATCACCG GTTTTCGCCA TGCCCTCGGT GGCTATCAGT CGATTGTCGG AGTGACGCCC
GACCTGGCAA CGTTTGCCAA GGCGATGGCG AATGGTTTCC CTATTGCTGC GCTTGCGGGT
CGCGCAGAAC TGATGGATCG TTTTGCGCCC GGCGGCGGGG TGTTCTTTGC CGGAACGTAC
AATGGGCATA GCATCGGCGT AGCGGCGGCG CTGGCGACGA TTGCAGAACT CGAGAGCGGC
GAGGTTCATG CACACTGCTT TGCGCTGGCG CAGATCGCCG CAGACGGGTT GATGCAGATT
GCTGCCGAAC TCGGCATTCC GCTCACGGTC GCGCGCTTCG GGTCGGTGTT CGTTCCCTAC
TTTATGGAAC CCGCTCCGAT CGAGAACTAT ACCGATCTGT TCCGCAACAA TACGGCGCGA
GACCTCTGGT TCCGCAAAAC GATGTGCGAG CACGGTATCT TCATGATCCC GACAGCCCTC
AAACGCAATC ATGTAAGTGC GGCGCACACT CGTGCCGATA TTGATCGCAC GCTGGAGATC
GCTCGCCAGG TGTTGCGTGC GATGCCGGCG GATCTTGAGC GCAGTGCTCG TTATCCATGA
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| Protein sequence | MTATMTNATL VERARQVIPG GVNSGNRVLP WPIAFVRAEG AYLFDADDRQ YLDYHAAFGP
IILGHNHPQV NAAVAEAMSR IDIIGAGVTD LEVELADRLN RHIPCAERVL LTNSGSEATY
AALRLARAVT GRNKIIKFQG TYHGWHDAVL MNVISPPEKI GQHDPLSLGM LPDVIRHTIV
LPFNDTEAVA DTLHRQGEEI AAVLVEVIPH NIGCVLPRPE FLQALRDLTR QHGVMLIFDE
VITGFRHALG GYQSIVGVTP DLATFAKAMA NGFPIAALAG RAELMDRFAP GGGVFFAGTY
NGHSIGVAAA LATIAELESG EVHAHCFALA QIAADGLMQI AAELGIPLTV ARFGSVFVPY
FMEPAPIENY TDLFRNNTAR DLWFRKTMCE HGIFMIPTAL KRNHVSAAHT RADIDRTLEI
ARQVLRAMPA DLERSARYP
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