Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3835 |
Symbol | |
ID | 5541338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5013808 |
End bp | 5014626 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895945 |
Product | hypothetical protein |
Protein accession | YP_001433891 |
Protein GI | 156743762 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.978272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.497273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGC GTTCGCTTTC GATCCCTCAG ATTGCCCTGA TTGCTCTTGT CGCCAGCGTG GTCCTGTTCA TTGCGGGTCA ACCGCAATCG CCGATGCTAT CGCGCTGGAC GCAGGGCAGC CAGACGGTTC CGACGATCGG TGCAGTTGCC GTGCCTGTCG CCGATCCGTC GCTGTTGATC ATTGTGGCGA GCGATAGCCT GTATGCAGCC GAACGCGCCC AACTCGATGA AGAGTCGCGC CGCGCCTGCG AGTATGTCGC GGCGCGTTTC GGCGGTTCGC TGGCGGCGCC GCTGACTGTT GCGTTCGTTC AGGACGCCGG ATGTTCGCTG AGCGGCATCG CCTTCACCGA CATTCGCAAG GTTCAGGTTC ACACGTGCAA CAGTATTAAT CGCGATCGGG CGATTGCCAT CCTGGCGCAT GAGTATACGC ACCAGTTGCA ACAGGATCGG TACGGATTGC GCCATCTCAG CGCCGATCTC ATGCTGTCAG AAGGGTTGGC GACGTGGGCG GCAGGGAAAT ACTGGCTTGG CGGTCGTCCC GATTTCCGCA GTTATGTCCA AATGCAGCGC GCCAATGGGA TATTCTATCC GCTTGCCACG CCGTATGCCG GGCGCGGTGT TGCGGTGATG AATGCGCTCT ATTACCAGTG GGCCAGTTTT GTCGAGTTCC TCATCGATCA GTATGGGCGC GAACGACTCG ACGCGCTCTA CGTTACCGGC AGCAGCGCGC CGGGTTCGGC GGATTACCAG GCGATCTACG GCAAGGACCT GATAACCCTG GAACAGGAGT GGATTGTGTG GCTGGATGAG GCGCGTTGA
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Protein sequence | MSQRSLSIPQ IALIALVASV VLFIAGQPQS PMLSRWTQGS QTVPTIGAVA VPVADPSLLI IVASDSLYAA ERAQLDEESR RACEYVAARF GGSLAAPLTV AFVQDAGCSL SGIAFTDIRK VQVHTCNSIN RDRAIAILAH EYTHQLQQDR YGLRHLSADL MLSEGLATWA AGKYWLGGRP DFRSYVQMQR ANGIFYPLAT PYAGRGVAVM NALYYQWASF VEFLIDQYGR ERLDALYVTG SSAPGSADYQ AIYGKDLITL EQEWIVWLDE AR
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