Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3824 |
Symbol | |
ID | 5541327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4998394 |
End bp | 4998813 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895934 |
Product | CBS domain-containing protein |
Protein accession | YP_001433880 |
Protein GI | 156743751 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGC CACCAATCTG CATTTCAGAA TCCACGACTC TCCCTGAAGC GCGGCGATTG ATGCAACGGC GCCGGGTGCG TCGCCTGCCG GTGCTTGACA GCGACGGTCG CCTGGCGGGG ATCGTCACCG AGGGTGATAT CAATCGAATC TCCGACTCGC AGGTCCACGA TATGCGTCAA TACAACCTGT ACCATCGTGT TGTCGATCTG CCGGTGCGTG ATTTTATGAC TCGTACTGTG ATCACGGTAG GACCTGATGA GCCGGTCATC GCTGTTGCTC AACTGTTGCT CCGCCATCGT ATCGGCGGCG TTCCGGTCGT TGAAGGTGAA CAGGTGGTTG GGGTCATTAC CGAAAGCGAT CTGTTTCGCC GGATGGTACA GCAGGAGGCG AGGGAATGGG GAGTAGGGAG TGAGACGTAG
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Protein sequence | MSRPPICISE STTLPEARRL MQRRRVRRLP VLDSDGRLAG IVTEGDINRI SDSQVHDMRQ YNLYHRVVDL PVRDFMTRTV ITVGPDEPVI AVAQLLLRHR IGGVPVVEGE QVVGVITESD LFRRMVQQEA REWGVGSET
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