Gene Rcas_3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3824 
Symbol 
ID5541327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4998394 
End bp4998813 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content58% 
IMG OID640895934 
ProductCBS domain-containing protein 
Protein accessionYP_001433880 
Protein GI156743751 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC CACCAATCTG CATTTCAGAA TCCACGACTC TCCCTGAAGC GCGGCGATTG 
ATGCAACGGC GCCGGGTGCG TCGCCTGCCG GTGCTTGACA GCGACGGTCG CCTGGCGGGG
ATCGTCACCG AGGGTGATAT CAATCGAATC TCCGACTCGC AGGTCCACGA TATGCGTCAA
TACAACCTGT ACCATCGTGT TGTCGATCTG CCGGTGCGTG ATTTTATGAC TCGTACTGTG
ATCACGGTAG GACCTGATGA GCCGGTCATC GCTGTTGCTC AACTGTTGCT CCGCCATCGT
ATCGGCGGCG TTCCGGTCGT TGAAGGTGAA CAGGTGGTTG GGGTCATTAC CGAAAGCGAT
CTGTTTCGCC GGATGGTACA GCAGGAGGCG AGGGAATGGG GAGTAGGGAG TGAGACGTAG
 
Protein sequence
MSRPPICISE STTLPEARRL MQRRRVRRLP VLDSDGRLAG IVTEGDINRI SDSQVHDMRQ 
YNLYHRVVDL PVRDFMTRTV ITVGPDEPVI AVAQLLLRHR IGGVPVVEGE QVVGVITESD
LFRRMVQQEA REWGVGSET