| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3810 |
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| Symbol | |
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| ID | 5541312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4980573 |
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| End bp | 4980989 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895920 |
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| Product | hydrogenase nickel insertion protein HypA |
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| Protein accession | YP_001433867 |
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| Protein GI | 156743738 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTTC GTGGGGGTTC GTGCGCCCTG CAATGGTCTC AGCGTATGCA TGAACTATCG
ATAGCGCACA GTCTGGTCGA GATTGCTGAA GAAGCAGCGG CAAAGGCGGG CGTCACGCGG
GTGACCGTGG TTCACCTTCG ACTGGGAGTG ATGTCGGGAG TGGTGCGTGA CGCGCTGCTG
TTCGGGTTCG ATATTGCAAC TGCCGGAACG CGACTGGAAG GGGCGCGGTT GGAGATTGAA
GATGTGCCGT TGCAGGCGTA CTGCGCTGGC TGCGATGCAG TGGTGACCTT GCCCGATCGG
CAGCGGTTTC GTTGCCCGCA GTGCAACGCG CCGTGCGGAC GAATCGTGAC GGGACAGGAG
ATCGAACTGA CGGCGCTGGA GTATGAAGAG AATGCGCCGG AAATCACAGC GTCGTGA
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| Protein sequence | MGVRGGSCAL QWSQRMHELS IAHSLVEIAE EAAAKAGVTR VTVVHLRLGV MSGVVRDALL
FGFDIATAGT RLEGARLEIE DVPLQAYCAG CDAVVTLPDR QRFRCPQCNA PCGRIVTGQE
IELTALEYEE NAPEITAS
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