Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3780 |
Symbol | |
ID | 5541282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4952173 |
End bp | 4953060 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895890 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_001433837 |
Protein GI | 156743708 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.834466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.123752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGCC ATTCAGTATT TGTCACGACC AGTCGTGGTT TGCGCCGTGA CTCTGTGCCA ATGCGACTAT TCGAGAAAGC CAAACGGCTG GGGGTCTGGA ATCCCAGCGA TATCGATTTC AGTCAGGACA TGCGCGACTG GCAGACGTTG ACCGATGACG AACGCGATCT GGTGCTGCGG CTGACTTCAC TCTTCCAGGC GGGCGAAGAG GCGGTCACGC TCGATCTGTT GCCGCTGGTC GCCACGATTG CTGCCGAAGG GCGCATCGAA GAGGAACTGT TTCTGACCAG TTTCCTGTGG GAAGAAGCCA AGCACACCGA CTTCTTCAAC CGCTTCCTCA CCGAAGTCGC CGGAGTGACG GGCGATCTGA GCCACTACCA TACCGCCAAC TATCGCGCGC TCATTCACGA GGCGTTGCCG GCCGCCATGG AGCGGCTCCG TGACGATCCC TCACCGGAGG CGCAAGCCAT CGCCTCGCTC ACCTACAACA TGATCGTCGA AGGCGTGCTG GCGGAAACCG GCTATCATGC CTACTTCACC ATGCTCGAAC GACGCAACCT GATGCCCGGC ACACGCAAAG GGATCGGGCT ACTGAAACAG GACGAGTCGC GTCATATCGC CTATGGCGTG TATCTCCTGT CGCGTCTGAT CAATGCCGAA CCACGCCTGT GGGATGTCGT TGTCGAGCGA ATGAACGAAC TCGTTGTCTA TGCGATGGGG GTCATCGACG ATGCCTTTGC CTGTTACGAG GTCGTGCCCT TTGGATTGAG CCACGATGAT TTTATGCAGT TTGCGATGGG GCAATTCGAG CGCCGTCTTG ATCGCATCGA ACGCGCCCGC AATCAGACGG TGGAAGCCAT GGAAGAGGAA GCTACCAATG ACGCTTGA
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Protein sequence | MMSHSVFVTT SRGLRRDSVP MRLFEKAKRL GVWNPSDIDF SQDMRDWQTL TDDERDLVLR LTSLFQAGEE AVTLDLLPLV ATIAAEGRIE EELFLTSFLW EEAKHTDFFN RFLTEVAGVT GDLSHYHTAN YRALIHEALP AAMERLRDDP SPEAQAIASL TYNMIVEGVL AETGYHAYFT MLERRNLMPG TRKGIGLLKQ DESRHIAYGV YLLSRLINAE PRLWDVVVER MNELVVYAMG VIDDAFACYE VVPFGLSHDD FMQFAMGQFE RRLDRIERAR NQTVEAMEEE ATNDA
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