| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3772 |
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| Symbol | |
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| ID | 5541274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4944174 |
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| End bp | 4945265 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895882 |
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| Product | NAD(P) transhydrogenase subunit alpha |
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| Protein accession | YP_001433829 |
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| Protein GI | 156743700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.504834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.386692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTG CCATTCCACA AGCCCACGCA CCCGATGAAC ACCGGGTGGC GCTCACGCCA
GCCGGCGTGC ACTCGCTGGT CATTGCCGGG CACACAGTGT TTGTCGAGAG CGGCGCCGGA
GCCGGCGCAG GGTTTACCGA TGCGTCCTAC AGCGCTGTAG GCGCGCATAT CGCATATGGT
CCTGAGGAGA TTTATGCGCG CGGCGACCTG TTGCTGACTA TCGATGGGGT GCCGGAGAAT
GCATTGCCGA TGGTGCGTCC CGGTCAGGTT GTAGCCGGTT TTTTGCACCT GGCCGTCACG
CCGCGCCGTG TCATCGATGC GCTGGCGGCG GCAGGCGCAT CGACGCTCAG TTATGAAGCG
ATCCGGCGCA ACGACGGTAT TGCGCCGGTG CTGTTGCCCA TGAGCGAGAT TGGCGGTCGT
TTGATGCCGC AACTGGCGGC GCATCTACTG GAAACGCCGA GCGGCGGGCG TGGCACCCTG
CTGGCGCCCA TTCCCGGCGT TCCATCGGCG GAAGTTGTGA TCCTGGGCGC CGGTCGAGTC
GGCGGCAATG CGGCATATGG GTTCAGTTCC TGGGGAGTGC AGACGACGGT GCTCGATCAG
GATATGGATC GATTGCGCGC GGTGGAACAG ATCTGCCGCG GGCACGTCAC AACCCGGCTT
GCCACCGAGA GCGCGCTGGC GCACGTGCTC CCCTTTGCCG ACGTGGTTAT TGGCGCCGTC
AAAGTTCCGC ACGGTCGTGC GCCCAAACTG GTAAGCGCCG CCATGGTTGC AACAATGAAG
CCACGCAGCG TCATCATCGA TGTTGCCATC GATGAAGGCG GATGTATCGA GACGAGTCGC
CCAACGACGC ACAGCAATCC GACCTACCTG GCGTCGGGAG TTCTGCACTA TGCCGTGCCC
AACATTCCGA GCGCCGTGGC ACGCACTGCT GCCCATGCAC TGAACAATGC GCTTTTGCCC
TTCGCACTGC GGATCGCATC CCAGGGACTC GAACGAGCAG CGCAGCAAGA TGACGCAATT
GCACGCGGAA TCGGTCTTCT CAACGGGCAG CCATACACAT CACATATCGA GCAAGCACTC
GAACACTCAT GA
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| Protein sequence | MDIAIPQAHA PDEHRVALTP AGVHSLVIAG HTVFVESGAG AGAGFTDASY SAVGAHIAYG
PEEIYARGDL LLTIDGVPEN ALPMVRPGQV VAGFLHLAVT PRRVIDALAA AGASTLSYEA
IRRNDGIAPV LLPMSEIGGR LMPQLAAHLL ETPSGGRGTL LAPIPGVPSA EVVILGAGRV
GGNAAYGFSS WGVQTTVLDQ DMDRLRAVEQ ICRGHVTTRL ATESALAHVL PFADVVIGAV
KVPHGRAPKL VSAAMVATMK PRSVIIDVAI DEGGCIETSR PTTHSNPTYL ASGVLHYAVP
NIPSAVARTA AHALNNALLP FALRIASQGL ERAAQQDDAI ARGIGLLNGQ PYTSHIEQAL
EHS
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