| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3634 |
|---|
| Symbol | |
|---|
| ID | 5541136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 4750005 |
|---|
| End bp | 4750670 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640895754 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001433701 |
|---|
| Protein GI | 156743572 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2427] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.514295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.287158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCC TGACACCCAC AAAAGCAACG GCGCCTCCAG GCAACGGCAG CCATCCCACG
CTCAGCAGTG ACGGCAAAAC GGAGACTCTT GCGCTCATTC TTGCGAAACT AGAGCGGATG
GAACAGCGTC TCGACCGGTA TGATGCGCTC GTGCAGCAAG CGTTGCCTAT GGCGGCAGTG
ATGACCGACA CCGTCGATGG CTGGATGCAC GAATTGAAGC GATCCGGAAT CGATATCGAT
GAGCGGACCA AAGAGGCGCT CCGACTCCTT GCCGAATTGA CGGCGCCGCA GTCGATGGAA
GCGCTTCGTC TGCTGGTGGC GATGCTGCCC ACGCTTGGCG CGCTGGTTCA GCAGGCGCCA
GGCGCGATTG CAACCCTGGT GGACACCGGT GACGATCTGG TGATGCGTCT GCGTGAGGCA
GGAGTGGACA TCGAGCACCT GGGGCACAGA GGCTTGCACG CAGCGAAAGC GTTGATCGAC
TCGAACGTCC TCGAAGACTC GGCGGTTGCG GTGATCAGCA ATGCCGCTCA GTCGCTGGCG
GATAGCGCCT GCGCTGCTCG TCCCGTCTCG GCGTTCGGGT TGTTGCGCGC CCTGGGTGAT
CCCGACGTGC AGCGCGCGCT CGGATTTTTC CTGGCATTTG CAAAGTCGTT CGGCAGCCGT
TGTTGA
|
|---|
| Protein sequence | MTTLTPTKAT APPGNGSHPT LSSDGKTETL ALILAKLERM EQRLDRYDAL VQQALPMAAV
MTDTVDGWMH ELKRSGIDID ERTKEALRLL AELTAPQSME ALRLLVAMLP TLGALVQQAP
GAIATLVDTG DDLVMRLREA GVDIEHLGHR GLHAAKALID SNVLEDSAVA VISNAAQSLA
DSACAARPVS AFGLLRALGD PDVQRALGFF LAFAKSFGSR C
|
|---|
| |