Gene Rcas_3631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3631 
Symbol 
ID5541133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4743953 
End bp4744933 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID640895751 
Producthypothetical protein 
Protein accessionYP_001433698 
Protein GI156743569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG TCCGGCGGTC GTCGCACGTT CCGGCCTGTG CCGGCTCCGC GACCCCGCTC 
CCGTCTCTGT TCGGCGCAAC CGCTGGTTGG CGGAAGGGGT CGACGGACGC GCCATTCGCA
ATGGACGTGG GAGCACGCCC GCCTTTCCCC CTCAGCCCCC AACGCTGGAC GCGGCGCAGA
CGGAGGGGCC GCATTCGGCT TCAGCGTGCC CCGCGCACCG GCGGTCCGGA TCAGCCCCGC
TGGACCCTGG CGGGCATCCG CCCATCCTGC ACGGGGGGAC CATCCCGCGC GTTGCCCGGC
GTCCACACCA TCCGGGATCG GCTTCATGTC GTCTGGAAGC GGACCCGCGC CAGCAGACGC
AGTCCTGCTC CGGAGGATGA TGACCAACGG GCGGTCATTG CGGTCCTCCT GGTCCGGCTG
CACGCCGCCC CTGAGCGTAG CCGCCTGGGG TTTCTCGATG CCGTTCCGAT CGCGCGCCAA
CCCACCCTGA CCACCGCCGA TGCGGTGCGC GGCGACGATC AGGTGCGCGC CTATCTCCGT
CAGCGCGCTA CCACGCTGGC GCGGGTGGGC GCTACACTGG ATGGGCGCAC GGTCCAGGTC
GGTGTTCGGC GCGCCACCCG CAGCACGGCG CCGACGTTGG CGCTGTGCGC TCAGGCTCTG
CGTGCCACCG ATTTGGCGGT CGCGTGCATC GACGTCGGGC ACGATCCCTG GACGGAGCAT
CCCCATCCCG ATCGGCTGGT GGTCTGGGAA CCGCACCCCA CGCCCGCTCC GTGCTATCGT
CTCAGCCATT GGTCCACCAA ACCGAGCGCG GCGGCAAGCC GAAAAAGGGG TCCGGTGGCA
GTGACCGATC CAGCTGGCGC CGTGGCCGAC GTATGCCTCG TGGGGTCATC CGAGTCGAGA
AGCTGGGGCG CCAGATGCGG CAAACCGTGC CCCCCTGCCG CGCTGGGCGG GCGATCTCCC
CCGGCTGCGC GCAGAGGTTG A
 
Protein sequence
MAGVRRSSHV PACAGSATPL PSLFGATAGW RKGSTDAPFA MDVGARPPFP LSPQRWTRRR 
RRGRIRLQRA PRTGGPDQPR WTLAGIRPSC TGGPSRALPG VHTIRDRLHV VWKRTRASRR
SPAPEDDDQR AVIAVLLVRL HAAPERSRLG FLDAVPIARQ PTLTTADAVR GDDQVRAYLR
QRATTLARVG ATLDGRTVQV GVRRATRSTA PTLALCAQAL RATDLAVACI DVGHDPWTEH
PHPDRLVVWE PHPTPAPCYR LSHWSTKPSA AASRKRGPVA VTDPAGAVAD VCLVGSSESR
SWGARCGKPC PPAALGGRSP PAARRG