Gene Rcas_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3627 
Symbol 
ID5541129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4736489 
End bp4736908 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content58% 
IMG OID640895747 
Producthypothetical protein 
Protein accessionYP_001433694 
Protein GI156743565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.805945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGCG TGCATCAGCA AAATCAGATC GCCACGATGG TCAAGGCACA GGGCGCCGTT 
GTCGAAGTCG TCTCACGAAC AAGAACCCAG GGCGAAAAAC GAAGCACACT CCACTATGCA
GTCGTGGAGT TTCGCACGGC GAACGGCGAG ACAATTCGCT TTGAGGACAC TATGGGCAGC
AACCCGCCAG CCTACCGCGT GGGTGATGCC GTCGAAGTGC TGTACGACCC GCAAACGCCG
CAGTCGGCGA TGATCGACTC CTGGTGGATA TGGATGCCTT CGACGATTGT GATGGTGGTC
GGTGGTTCTT TTGCGGTTAT AGGCGGACTT GCATGGCTCG ATGCATTCTT CAATCTCATC
AAACCCGGCG GTCTGCTGGG ATTGCCGGGC ATTCTGCTGC TGCGCCGGAG ACGCGGGTAG
 
Protein sequence
MWRVHQQNQI ATMVKAQGAV VEVVSRTRTQ GEKRSTLHYA VVEFRTANGE TIRFEDTMGS 
NPPAYRVGDA VEVLYDPQTP QSAMIDSWWI WMPSTIVMVV GGSFAVIGGL AWLDAFFNLI
KPGGLLGLPG ILLLRRRRG