Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3627 |
Symbol | |
ID | 5541129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4736489 |
End bp | 4736908 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895747 |
Product | hypothetical protein |
Protein accession | YP_001433694 |
Protein GI | 156743565 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.805945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCGCG TGCATCAGCA AAATCAGATC GCCACGATGG TCAAGGCACA GGGCGCCGTT GTCGAAGTCG TCTCACGAAC AAGAACCCAG GGCGAAAAAC GAAGCACACT CCACTATGCA GTCGTGGAGT TTCGCACGGC GAACGGCGAG ACAATTCGCT TTGAGGACAC TATGGGCAGC AACCCGCCAG CCTACCGCGT GGGTGATGCC GTCGAAGTGC TGTACGACCC GCAAACGCCG CAGTCGGCGA TGATCGACTC CTGGTGGATA TGGATGCCTT CGACGATTGT GATGGTGGTC GGTGGTTCTT TTGCGGTTAT AGGCGGACTT GCATGGCTCG ATGCATTCTT CAATCTCATC AAACCCGGCG GTCTGCTGGG ATTGCCGGGC ATTCTGCTGC TGCGCCGGAG ACGCGGGTAG
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Protein sequence | MWRVHQQNQI ATMVKAQGAV VEVVSRTRTQ GEKRSTLHYA VVEFRTANGE TIRFEDTMGS NPPAYRVGDA VEVLYDPQTP QSAMIDSWWI WMPSTIVMVV GGSFAVIGGL AWLDAFFNLI KPGGLLGLPG ILLLRRRRG
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